Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00856
(460 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 87 6e-18
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 73 8e-14
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 73 8e-14
07_01_1001 - 8460467-8460799 64 7e-11
07_03_0321 + 16757414-16757743 63 1e-10
01_06_0098 - 26416768-26416998 31 0.34
08_02_1093 - 24271826-24273427 30 1.0
12_02_1217 + 27082452-27083593,27085041-27085158 29 1.4
11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877 29 1.8
12_01_0140 - 1088400-1088843 29 2.4
05_01_0120 - 828834-831143 28 3.1
10_08_0104 + 14824122-14824178,14824274-14824318,14824419-148245... 28 4.2
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 4.2
03_03_0256 + 15898702-15900420 28 4.2
01_07_0053 + 40772966-40773080,40773484-40773578,40773730-407738... 28 4.2
12_01_0141 - 1091579-1091983 27 5.5
03_02_0539 - 9329572-9330729,9330988-9331041 27 5.5
01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152 27 5.5
04_04_1284 + 32376870-32376874,32376876-32376935,32377166-323773... 27 7.3
04_04_1672 - 35242468-35243235,35243481-35243645 27 9.6
02_05_0772 - 31643142-31643329,31643650-31643683,31644037-316442... 27 9.6
01_07_0135 + 41342118-41342181,41342326-41343260 27 9.6
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 87.0 bits (206), Expect = 6e-18
Identities = 38/66 (57%), Positives = 56/66 (84%)
Frame = -1
Query: 454 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
M+ +AAYLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGRE
Sbjct: 1 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60
Query: 274 KLSSMP 257
K +S+P
Sbjct: 61 KFASVP 66
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 73.3 bits (172), Expect = 8e-14
Identities = 31/67 (46%), Positives = 50/67 (74%)
Frame = -1
Query: 457 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 278
+M++++AYLLA L G P+A D+ IL SVG E D K++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252
Query: 277 EKLSSMP 257
EK +S+P
Sbjct: 253 EKFASVP 259
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 73.3 bits (172), Expect = 8e-14
Identities = 30/66 (45%), Positives = 50/66 (75%)
Frame = -1
Query: 454 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
M++++AYL+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LIA GRE
Sbjct: 1 MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60
Query: 274 KLSSMP 257
K +S+P
Sbjct: 61 KFASVP 66
>07_01_1001 - 8460467-8460799
Length = 110
Score = 63.7 bits (148), Expect = 7e-11
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = -1
Query: 454 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60
Query: 274 KLS 266
L+
Sbjct: 61 MLA 63
>07_03_0321 + 16757414-16757743
Length = 109
Score = 62.9 bits (146), Expect = 1e-10
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = -1
Query: 454 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
MR+VAAYL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E
Sbjct: 1 MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60
Query: 274 KLS 266
L+
Sbjct: 61 MLA 63
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.5 bits (68), Expect = 0.34
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 403 PAAADVEKILSSVGIEADGEKLKKVITELNGKD 305
P V KI+ +V IEAD + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>08_02_1093 - 24271826-24273427
Length = 533
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 457 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR 278
+ R AA +AV G+TT AAA + SS G + ++ + L +D +A R
Sbjct: 3 RKREAAAAAVAVADGETTTAAARADSSSSSEGGSVCDDVVRNIFARLPARDAVASMALSR 62
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 436 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKL 338
Y+LA+ TPA +D E+ VG +ADG+ L
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59
>11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877
Length = 258
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 412 KTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIA 287
KTT E +L+ + DG+K KKV+ L ++VE+L++
Sbjct: 137 KTTTEDDHEEVLLAYRSRKEDGKKRKKVVRRLGKEEVERLLS 178
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1
Query: 352 DGEKLKKVITELNGKDVEQLIA 287
DG+K+KKV+ L ++VE+L++
Sbjct: 36 DGKKMKKVVKRLGKEEVERLLS 57
>12_01_0140 - 1088400-1088843
Length = 147
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -1
Query: 412 KTTPAAADVEKILSSVGI--EADGEKLKKVITELNGKDVEQLIA 287
KTT D E++L + + DG+K KKV+ L ++VE+L++
Sbjct: 25 KTTTTEDDHEEVLLAYRPREKEDGKKRKKVVRRLGKEEVERLLS 68
>05_01_0120 - 828834-831143
Length = 769
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +3
Query: 246 SASTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 425
+A F P+++S +S+ S SPS S PT L + S+ L PS+
Sbjct: 494 AAEASTSPPFLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASSNFSHTLVPSS 553
Query: 426 AS 431
S
Sbjct: 554 RS 555
>10_08_0104 +
14824122-14824178,14824274-14824318,14824419-14824536,
14825522-14825581,14825783-14825891,14825972-14826197,
14826274-14826390,14826510-14826611
Length = 277
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 427 AVLGGKTTPAAADVEKILSSVGIEADGEKLK 335
A+L GK TP D+E+ L + G GE++K
Sbjct: 14 ALLRGKETPVILDLEESLRAKGDMTQGEEVK 44
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 345 SPSASIPTELRIFSTSAAAGVVLPPSTASKYAA 443
+P+ IPT F T A V +PP+TA AA
Sbjct: 533 APAPPIPTPSMPFPTVPAPPVTVPPATAPSMAA 565
>03_03_0256 + 15898702-15900420
Length = 572
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 246 SASTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSA 356
SA+ +DD+ +A + STS PL + + F+P+A
Sbjct: 35 SAAPAVDDTALALSAAAASTSRPLDPSLHLVPFNPTA 71
>01_07_0053 +
40772966-40773080,40773484-40773578,40773730-40773843,
40773984-40774088,40774179-40774250,40774293-40774346,
40774507-40774619,40774705-40774839,40774941-40775009,
40775140-40775227,40775327-40775398,40775476-40775576,
40775836-40775953,40776054-40776113,40776206-40776316,
40776499-40776573,40776821-40776854,40777453-40777805,
40778154-40778222,40778526-40778762
Length = 729
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/69 (23%), Positives = 31/69 (44%)
Frame = +3
Query: 240 RCSASTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPP 419
+CS+S + + ++ SS+++ +S SPSA+ LR + A G
Sbjct: 514 KCSSSYQLSKKRAAELSVWSEMMSSSSSLVSAISASPSATAKARLRHDDAATATGAAAAA 573
Query: 420 STASKYAAT 446
+ A++ T
Sbjct: 574 AVAARQLKT 582
>12_01_0141 - 1091579-1091983
Length = 134
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 358 EADGEKLKKVITELNGKDVEQLIA 287
E DG+K KKV+ L ++VE+L++
Sbjct: 30 EEDGKKRKKVVRRLGKEEVERLLS 53
>03_02_0539 - 9329572-9330729,9330988-9331041
Length = 403
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 237 CRCSASTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTS-AAAGVVL 413
CR + +G S + A S S+S P SS L ++ +P+ AAAG ++
Sbjct: 140 CRRNKRSGKSSS-AAAAGASSSSSKPSSSAARQLPGGGASPMPSAAASTQPGGAAAGAII 198
Query: 414 PPSTAS 431
PPS S
Sbjct: 199 PPSGLS 204
>01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152
Length = 205
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 336 LSFSPSASIPTELRI--FSTSAAAGVVLPPSTAS 431
LS+SPSAS T+L I + + A V PPS++S
Sbjct: 114 LSYSPSASSITDLPIAPYPLNYAVAPVAPPSSSS 147
>04_04_1284 +
32376870-32376874,32376876-32376935,32377166-32377301,
32377439-32377596,32377791-32377881,32377975-32378094,
32378166-32378234,32378354-32378445,32378578-32378680,
32378761-32378868,32378949-32379011,32379073-32379144,
32379322-32379399,32379478-32379540,32379617-32379680,
32379817-32379902,32380456-32380569,32380760-32380837,
32381068-32381303,32381486-32381576,32381706-32381894,
32382082-32382117
Length = 703
Score = 27.1 bits (57), Expect = 7.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 373 SSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVE 251
+ VG D EKL+ ELN + +E L+A K+ +PV+
Sbjct: 426 TGVGNIDDSEKLRP--EELNQQTIEALVAENNLKMEILPVD 464
>04_04_1672 - 35242468-35243235,35243481-35243645
Length = 310
Score = 26.6 bits (56), Expect = 9.6
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 240 RCSASTGIDDSFSRPAAISCSTSLPLS---SVITFLSFSPSASIPTELRIFSTSAAAGVV 410
+C+ +DD+FSR A +CS + V+T ++F I + ++ ++
Sbjct: 184 KCAFVRPVDDAFSRKMAANCSANPNTKQDLDVVTPITFDNGYYIALTRKQGVFTSDMALI 243
Query: 411 LPPSTAS 431
L P TA+
Sbjct: 244 LDPQTAA 250
>02_05_0772 -
31643142-31643329,31643650-31643683,31644037-31644221,
31644483-31645146
Length = 356
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 246 SASTGIDDSFSRPAAISCSTSLP 314
+ + IDDS SRP A++ S +LP
Sbjct: 322 ATARSIDDSSSRPPAVNLSPALP 344
>01_07_0135 + 41342118-41342181,41342326-41343260
Length = 332
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 415 GKTTPAAADVEKILSSVGIEADGEKLKK--VITELNGKDVEQLIAAGREKLSSMPVEA 248
G PAA+DV K+ S GI++ + ++ L G ++ + E L++ +A
Sbjct: 34 GNNLPAASDVVKLYKSKGIDSMRIYFPRSDILQALTGSNIALTMDVANENLAAFAADA 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,299,717
Number of Sequences: 37544
Number of extensions: 133105
Number of successful extensions: 509
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -