Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00856
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...   100   8e-22
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...   100   8e-22
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...   100   8e-22
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...   100   1e-21
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...   100   1e-21
AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-P...    30   1.7  
AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-P...    30   1.7  
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    29   2.3  
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    29   2.3  
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    29   2.3  
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    29   2.3  
AE014298-1439|AAF46576.2|  313|Drosophila melanogaster CG15307-P...    27   9.2  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score =  100 bits (240), Expect = 8e-22
 Identities = 49/67 (73%), Positives = 56/67 (83%)
 Frame = -1

Query: 454 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLSSMPV 254
           KLSSMPV
Sbjct: 61  KLSSMPV 67


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score =  100 bits (240), Expect = 8e-22
 Identities = 49/67 (73%), Positives = 56/67 (83%)
 Frame = -1

Query: 454 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLSSMPV 254
           KLSSMPV
Sbjct: 61  KLSSMPV 67


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score =  100 bits (240), Expect = 8e-22
 Identities = 49/67 (73%), Positives = 56/67 (83%)
 Frame = -1

Query: 454 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLSSMPV 254
           KLSSMPV
Sbjct: 61  KLSSMPV 67


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score =  100 bits (239), Expect = 1e-21
 Identities = 49/67 (73%), Positives = 55/67 (82%)
 Frame = -1

Query: 454 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
           MRYVAAYLLAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLSSMPV 254
           KLSSMPV
Sbjct: 61  KLSSMPV 67


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score =  100 bits (239), Expect = 1e-21
 Identities = 49/67 (73%), Positives = 55/67 (82%)
 Frame = -1

Query: 454 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGRE 275
           MRYVAAYLLAVLGGK +PA  D+EKILSSVG+E D E+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 274 KLSSMPV 254
           KLSSMPV
Sbjct: 61  KLSSMPV 67


>AE013599-3680|AAF47056.1|  157|Drosophila melanogaster CG12491-PA
           protein.
          Length = 157

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 21/62 (33%), Positives = 29/62 (46%)
 Frame = +3

Query: 246 SASTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 425
           ++ST    S S   + S STS P S+  T  S S  +S  +     STS+       PST
Sbjct: 38  NSSTPSTSSSSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPST 97

Query: 426 AS 431
           +S
Sbjct: 98  SS 99


>AE013599-3679|ABI31112.1|  157|Drosophila melanogaster CG34105-PA
           protein.
          Length = 157

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 21/62 (33%), Positives = 29/62 (46%)
 Frame = +3

Query: 246 SASTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 425
           ++ST    S S   + S STS P S+  T  S S  +S  +     STS+       PST
Sbjct: 38  NSSTPSTSSSSSTPSSSSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPST 97

Query: 426 AS 431
           +S
Sbjct: 98  SS 99


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 305 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 415
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 305 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 415
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 305 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 415
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 305 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 415
           I  VEL D F K   V  D  G++ + N+  S RGLA
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51


>AE014298-1439|AAF46576.2|  313|Drosophila melanogaster CG15307-PA
           protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +3

Query: 282 PAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 416
           P   S   +L   +V TF++ + S + PT + ++ T +   +V+P
Sbjct: 154 PIPTSTMATLQAQTVATFIAATGSKNRPTTIVVYPTVSPESIVIP 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,809,245
Number of Sequences: 53049
Number of extensions: 205192
Number of successful extensions: 857
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)