Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00855
         (741 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0200 - 1589768-1590023,1591134-1591264                           29   5.1  
08_02_0741 - 20618319-20618523,20618627-20618684,20618807-206191...    28   6.8  
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928...    28   6.8  
10_08_0977 - 21985149-21985277,21985348-21985722,21985824-219858...    28   9.0  

>03_01_0200 - 1589768-1590023,1591134-1591264
          Length = 128

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 23/82 (28%), Positives = 36/82 (43%)
 Frame = -2

Query: 329 PP*DRSSKVSV*LQRLPHPSNRNALCFTAEIGGAVAPTRADSQEVLPPVKNCYLMSLTNA 150
           PP  R+++V +   RLP P+ R  LCF   IG      + DS        +    + ++ 
Sbjct: 32  PP--RAARVVLRGFRLPDPAARKFLCFEDSIGLQTEHQKPDSTSTGAKQNSSSDDNSSST 89

Query: 149 DGPNCSAIFISPINLKYVMFMI 84
           DGP    I    I    V+++I
Sbjct: 90  DGPPVLTILAGIIVFLLVLWVI 111


>08_02_0741 -
           20618319-20618523,20618627-20618684,20618807-20619164,
           20619253-20619337,20619452-20619726,20619807-20620039,
           20620371-20620398
          Length = 413

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -2

Query: 281 PHPSNRNALCFTAEIGGAVAPTRADSQEVLPPVKNC 174
           P+PS+++ L  +  IG    P+++   ++ P   NC
Sbjct: 352 PYPSSKSPLESSDTIGSPSTPSKSSCTDITPSTNNC 387


>02_05_1011 +
           33487670-33487958,33490794-33492100,33492541-33492853,
           33493190-33494247
          Length = 988

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 437 KNCFFFLLPRCVDDLTAHPVLSGYWN 360
           ++CFFFLLP  V  L   PV++   N
Sbjct: 4   RSCFFFLLPLLVAALAGSPVVTAQRN 29


>10_08_0977 -
           21985149-21985277,21985348-21985722,21985824-21985874,
           21985964-21986189,21986289-21986359,21986430-21986549,
           21986641-21986835,21986921-21986985,21987894-21987984,
           21988700-21988761,21988854-21988904,21989172-21989273,
           21989873-21989980,21990071-21990134,21990246-21990392
          Length = 618

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 61  NLIITYPAIINITYFKLIGDIKIAEQFGPSALVSDIK 171
           +L I  P ++N+T   L G  K+A +  P ++V DI+
Sbjct: 133 HLSIYSPHVVNLTLIDLPGLTKVAVEGQPESIVQDIE 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,642,427
Number of Sequences: 37544
Number of extensions: 384231
Number of successful extensions: 715
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)