Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00855
         (741 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010302-1|AAQ23620.1|  891|Drosophila melanogaster LD02432p pro...    29   6.6  
BT001412-1|AAN71167.1|  867|Drosophila melanogaster GH11271p pro...    29   6.6  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   6.6  
AE013599-2863|AAF57575.1|  891|Drosophila melanogaster CG11961-P...    29   6.6  
AE013599-2862|AAF57574.2|  867|Drosophila melanogaster CG11961-P...    29   6.6  

>BT010302-1|AAQ23620.1|  891|Drosophila melanogaster LD02432p
           protein.
          Length = 891

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -2

Query: 278 HPSNRNALCFTAE---IGGAVAPTRADSQEVLPPVKNCYLMSLTNADGPNCSAIFISPIN 108
           H + +N+L   A    +G  V      S+  + P K  Y M L+   GPN  A+FI P+N
Sbjct: 738 HKTRKNSLWIPASEPVLGENVPTVLLLSKNTVSPTKIRYEMQLS---GPNHMALFIQPLN 794


>BT001412-1|AAN71167.1|  867|Drosophila melanogaster GH11271p
           protein.
          Length = 867

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -2

Query: 278 HPSNRNALCFTAE---IGGAVAPTRADSQEVLPPVKNCYLMSLTNADGPNCSAIFISPIN 108
           H + +N+L   A    +G  V      S+  + P K  Y M L+   GPN  A+FI P+N
Sbjct: 714 HKTRKNSLWIPASEPVLGENVPTVLLLSKNTVSPTKIRYEMQLS---GPNHMALFIQPLN 770


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -2

Query: 215 RADSQEVLPPVKNCYLMSLTNADGPNCSAIFISPINLKYVMFMIAGYVI 69
           R DS   L     CYL +L     P  + I  S INL  +    A YV+
Sbjct: 745 RKDSASQLAVALKCYLRTLATFPKPLVAGIVGSQINLGVMQLPFADYVV 793


>AE013599-2863|AAF57575.1|  891|Drosophila melanogaster CG11961-PA,
           isoform A protein.
          Length = 891

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -2

Query: 278 HPSNRNALCFTAE---IGGAVAPTRADSQEVLPPVKNCYLMSLTNADGPNCSAIFISPIN 108
           H + +N+L   A    +G  V      S+  + P K  Y M L+   GPN  A+FI P+N
Sbjct: 738 HKTRKNSLWIPASEPVLGENVPTVLLLSKNTVSPTKIRYEMQLS---GPNHMALFIQPLN 794


>AE013599-2862|AAF57574.2|  867|Drosophila melanogaster CG11961-PB,
           isoform B protein.
          Length = 867

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
 Frame = -2

Query: 278 HPSNRNALCFTAE---IGGAVAPTRADSQEVLPPVKNCYLMSLTNADGPNCSAIFISPIN 108
           H + +N+L   A    +G  V      S+  + P K  Y M L+   GPN  A+FI P+N
Sbjct: 714 HKTRKNSLWIPASEPVLGENVPTVLLLSKNTVSPTKIRYEMQLS---GPNHMALFIQPLN 770


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,608,898
Number of Sequences: 53049
Number of extensions: 661657
Number of successful extensions: 1352
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)