Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00852
         (719 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0113 + 1751204-1751507,1751791-1752039,1753136-1753398,175...    31   0.70 
02_05_0331 + 28003454-28003912,28004649-28004873,28005017-280053...    30   2.1  
04_04_0922 - 29439313-29439718,29439842-29440053                       29   4.9  
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196...    29   4.9  
06_03_1225 + 28538515-28538721,28538799-28539000,28539241-285394...    28   8.6  

>09_01_0113 +
           1751204-1751507,1751791-1752039,1753136-1753398,
           1755192-1755357,1755445-1755534,1756376-1756674,
           1757022-1757231
          Length = 526

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
 Frame = +1

Query: 121 RTAPEERAISCIS-RVLGVS*MIQPDFYRRFTIRP*RRTDVFSFIIYVWKII--RRP*GI 291
           R+ P +   + IS +V G +  + P++ R + + P  ++DVFSF I + +I+  RRP  +
Sbjct: 388 RSGPSDTEKTHISTKVKGTAGYLDPEYLRTYQLTP--KSDVFSFGILLVEILSARRPVEL 445

Query: 292 PKTGQRRFNDDASFRGTAKG 351
            +  + R     +F+   +G
Sbjct: 446 KRAAEERITIRWTFKKFNEG 465


>02_05_0331 +
           28003454-28003912,28004649-28004873,28005017-28005370,
           28005673-28005702,28006869-28007342
          Length = 513

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -1

Query: 368 FQK*CNPFAVPLKLASSLNRRCPVFGIP*GLLMIFHTYIIKLKTSVLRYGRIVN 207
           FQ   +  A  L LA+S  RR    G+P GLL+  H ++    T +L    +V+
Sbjct: 24  FQAALSAAASALYLAASPRRRHARLGVPRGLLLALHPFLSLAATGLLALAFLVS 77


>04_04_0922 - 29439313-29439718,29439842-29440053
          Length = 205

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = -3

Query: 597 ILEASTDARVSFIRRGGDCMRRCVYALLSSNTEISS 490
           + EA  DAR S +   GD   R VYAL+SS   IS+
Sbjct: 167 LAEAGRDARASSVICLGDLPARFVYALMSSIIIIST 202


>01_05_0279 +
           20318440-20318688,20318785-20318931,20319449-20319611,
           20319770-20319887,20320607-20320676,20320774-20320854,
           20320924-20320959,20321129-20321149,20321586-20321642,
           20321716-20321827,20321905-20322178,20322454-20322556,
           20323244-20323459,20324615-20324665,20325339-20327963
          Length = 1440

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 377 EQGDLWLSAAPRLKDFNEDFQIVIEGIRGSSFMSDLAIDDISV-LEDR 517
           E  + +L  A R KD +E     ++ IRG +F  + A+D+ +  LED+
Sbjct: 586 ESMEAYLHGAERFKDIDETTGNYVKKIRGLAFEIEDAVDEFTYKLEDK 633


>06_03_1225 +
           28538515-28538721,28538799-28539000,28539241-28539472,
           28539560-28539713,28539792-28540136
          Length = 379

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +1

Query: 124 TAPEERAISCISRVLGVS*MIQPDFYR--RFTIRP*RRTDVFSFIIYVWKII 273
           T   + A  C  RV+G S  I P++    R++++    TDVFSF + V +II
Sbjct: 197 TLVSDVAEECTRRVVGTSGYIAPEYASEGRYSLK----TDVFSFGVVVLEII 244


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,634,128
Number of Sequences: 37544
Number of extensions: 398534
Number of successful extensions: 1072
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)