Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00851
(811 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001891-1|AAH01891.1| 423|Homo sapiens COP9 constitutive photo... 128 3e-29
AF098109-1|AAD41247.1| 423|Homo sapiens COP9 complex subunit 3 ... 128 3e-29
AF031647-1|AAC14197.1| 403|Homo sapiens JAB1-containing signalo... 128 3e-29
BC011658-1|AAH11658.2| 520|Homo sapiens HECTD1 protein protein. 31 6.5
AY739714-1|AAW65983.1| 1224|Homo sapiens HECTD1 protein. 31 6.5
AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin r... 31 6.5
AL110222-1|CAB53681.1| 959|Homo sapiens hypothetical protein pr... 31 6.5
AB032957-1|BAA86445.2| 2168|Homo sapiens KIAA1131 protein protein. 31 6.5
>BC001891-1|AAH01891.1| 423|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 3 (Arabidopsis)
protein.
Length = 423
Score = 128 bits (308), Expect = 3e-29
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = +1
Query: 1 DLCQLCLLSKCMKPAVEFLDTDVTGIGNELGGINDSKHFLLYYYYGGMIYTAMKNYDRAL 180
DLCQLCLL+KC KPA+ +LD D+ I E G D+KHFL YYYYGGMIYT +KN++RAL
Sbjct: 144 DLCQLCLLAKCFKPALPYLDVDMMDICKE-NGAYDAKHFLCYYYYGGMIYTGLKNFERAL 202
Query: 181 YFFEVVVTVPAMVVSHIMLEAYKK 252
YF+E +T PAM VSHIMLE+YKK
Sbjct: 203 YFYEQAITTPAMAVSHIMLESYKK 226
Score = 103 bits (248), Expect = 6e-22
Identities = 47/97 (48%), Positives = 70/97 (72%)
Frame = +2
Query: 479 KNFFNAFVERVASRVELSGPLQAETYILNMIEEGEIYAMINQKDGMVVFLDSPEKYASPE 658
K F ++ +ASRV+LSGP +AE Y+L+MIE+GEI+A INQKDGMV F D+PEKY +P
Sbjct: 312 KTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPA 371
Query: 659 TLCVLEQQMAACTKLHQYIQGMGVQIQVHPQYVKNQL 769
L ++Q+M C +L + ++ M +I V+PQ+V+ +
Sbjct: 372 MLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSM 408
Score = 89.8 bits (213), Expect = 1e-17
Identities = 48/87 (55%), Positives = 59/87 (67%), Gaps = 9/87 (10%)
Frame = +3
Query: 240 SVQEIILVSLILHGKVLPMPKYTSQVVCRFLKPLSAPYHDLV---------ASQHAASKH 392
S ++ ILVSLIL GKV +PKYTSQ+V RF+KPLS YH+L ++ +KH
Sbjct: 223 SYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKH 282
Query: 393 REIFVRDKNMGLVNQVLNSMYKKNIQR 473
E F RD NMGLV Q L+S+YKKNIQR
Sbjct: 283 SETFTRDNNMGLVKQCLSSLYKKNIQR 309
>AF098109-1|AAD41247.1| 423|Homo sapiens COP9 complex subunit 3
protein.
Length = 423
Score = 128 bits (308), Expect = 3e-29
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = +1
Query: 1 DLCQLCLLSKCMKPAVEFLDTDVTGIGNELGGINDSKHFLLYYYYGGMIYTAMKNYDRAL 180
DLCQLCLL+KC KPA+ +LD D+ I E G D+KHFL YYYYGGMIYT +KN++RAL
Sbjct: 144 DLCQLCLLAKCFKPALPYLDVDMMDICKE-NGAYDAKHFLCYYYYGGMIYTGLKNFERAL 202
Query: 181 YFFEVVVTVPAMVVSHIMLEAYKK 252
YF+E +T PAM VSHIMLE+YKK
Sbjct: 203 YFYEQAITTPAMAVSHIMLESYKK 226
Score = 103 bits (248), Expect = 6e-22
Identities = 47/97 (48%), Positives = 70/97 (72%)
Frame = +2
Query: 479 KNFFNAFVERVASRVELSGPLQAETYILNMIEEGEIYAMINQKDGMVVFLDSPEKYASPE 658
K F ++ +ASRV+LSGP +AE Y+L+MIE+GEI+A INQKDGMV F D+PEKY +P
Sbjct: 312 KTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPA 371
Query: 659 TLCVLEQQMAACTKLHQYIQGMGVQIQVHPQYVKNQL 769
L ++Q+M C +L + ++ M +I V+PQ+V+ +
Sbjct: 372 MLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSM 408
Score = 89.8 bits (213), Expect = 1e-17
Identities = 48/87 (55%), Positives = 59/87 (67%), Gaps = 9/87 (10%)
Frame = +3
Query: 240 SVQEIILVSLILHGKVLPMPKYTSQVVCRFLKPLSAPYHDLV---------ASQHAASKH 392
S ++ ILVSLIL GKV +PKYTSQ+V RF+KPLS YH+L ++ +KH
Sbjct: 223 SYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKH 282
Query: 393 REIFVRDKNMGLVNQVLNSMYKKNIQR 473
E F RD NMGLV Q L+S+YKKNIQR
Sbjct: 283 SETFTRDNNMGLVKQCLSSLYKKNIQR 309
>AF031647-1|AAC14197.1| 403|Homo sapiens JAB1-containing
signalosome subunit 3 protein.
Length = 403
Score = 128 bits (308), Expect = 3e-29
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = +1
Query: 1 DLCQLCLLSKCMKPAVEFLDTDVTGIGNELGGINDSKHFLLYYYYGGMIYTAMKNYDRAL 180
DLCQLCLL+KC KPA+ +LD D+ I E G D+KHFL YYYYGGMIYT +KN++RAL
Sbjct: 124 DLCQLCLLAKCFKPALPYLDVDMMDICKE-NGAYDAKHFLCYYYYGGMIYTGLKNFERAL 182
Query: 181 YFFEVVVTVPAMVVSHIMLEAYKK 252
YF+E +T PAM VSHIMLE+YKK
Sbjct: 183 YFYEQAITTPAMAVSHIMLESYKK 206
Score = 103 bits (248), Expect = 6e-22
Identities = 47/97 (48%), Positives = 70/97 (72%)
Frame = +2
Query: 479 KNFFNAFVERVASRVELSGPLQAETYILNMIEEGEIYAMINQKDGMVVFLDSPEKYASPE 658
K F ++ +ASRV+LSGP +AE Y+L+MIE+GEI+A INQKDGMV F D+PEKY +P
Sbjct: 292 KTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPA 351
Query: 659 TLCVLEQQMAACTKLHQYIQGMGVQIQVHPQYVKNQL 769
L ++Q+M C +L + ++ M +I V+PQ+V+ +
Sbjct: 352 MLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSM 388
Score = 89.8 bits (213), Expect = 1e-17
Identities = 48/87 (55%), Positives = 59/87 (67%), Gaps = 9/87 (10%)
Frame = +3
Query: 240 SVQEIILVSLILHGKVLPMPKYTSQVVCRFLKPLSAPYHDLV---------ASQHAASKH 392
S ++ ILVSLIL GKV +PKYTSQ+V RF+KPLS YH+L ++ +KH
Sbjct: 203 SYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKH 262
Query: 393 REIFVRDKNMGLVNQVLNSMYKKNIQR 473
E F RD NMGLV Q L+S+YKKNIQR
Sbjct: 263 SETFTRDNNMGLVKQCLSSLYKKNIQR 289
>BC011658-1|AAH11658.2| 520|Homo sapiens HECTD1 protein protein.
Length = 520
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 229 CGI--QPLPEQSLQLQRNTKLYHSFSLPYKSCPHSNNIV 119
CG+ P P+ S +L+R TKL+H + C N +V
Sbjct: 134 CGLFTAPFPQDSDELERITKLFHFLGIFLAKCIQDNRLV 172
>AY739714-1|AAW65983.1| 1224|Homo sapiens HECTD1 protein.
Length = 1224
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 229 CGI--QPLPEQSLQLQRNTKLYHSFSLPYKSCPHSNNIV 119
CG+ P P+ S +L+R TKL+H + C N +V
Sbjct: 838 CGLFTAPFPQDSDELERITKLFHFLGIFLAKCIQDNRLV 876
>AY254380-1|AAP13073.1| 2612|Homo sapiens E3 ligase for inhibin
receptor protein.
Length = 2612
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 229 CGI--QPLPEQSLQLQRNTKLYHSFSLPYKSCPHSNNIV 119
CG+ P P+ S +L+R TKL+H + C N +V
Sbjct: 2226 CGLFTAPFPQDSDELERITKLFHFLGIFLAKCIQDNRLV 2264
>AL110222-1|CAB53681.1| 959|Homo sapiens hypothetical protein
protein.
Length = 959
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 229 CGI--QPLPEQSLQLQRNTKLYHSFSLPYKSCPHSNNIV 119
CG+ P P+ S +L+R TKL+H + C N +V
Sbjct: 573 CGLFTAPFPQDSDELERITKLFHFLGIFLAKCIQDNRLV 611
>AB032957-1|BAA86445.2| 2168|Homo sapiens KIAA1131 protein protein.
Length = 2168
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 229 CGI--QPLPEQSLQLQRNTKLYHSFSLPYKSCPHSNNIV 119
CG+ P P+ S +L+R TKL+H + C N +V
Sbjct: 1782 CGLFTAPFPQDSDELERITKLFHFLGIFLAKCIQDNRLV 1820
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,176,668
Number of Sequences: 237096
Number of extensions: 2747444
Number of successful extensions: 5054
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5047
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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