Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00851
         (811 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024761-10|AAP13759.1|  501|Caenorhabditis elegans Cop-9 signal...    37   0.020
U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine rece...    30   1.7  
Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical pr...    28   9.1  
Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical pr...    28   9.1  
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep...    28   9.1  
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue...    28   9.1  

>AC024761-10|AAP13759.1|  501|Caenorhabditis elegans Cop-9
           signalosome subunit protein 3 protein.
          Length = 501

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +1

Query: 109 KHFLLYYYYGGMIYTAMKNYDRALYFFEVVVTVPAMVVSHIMLEAYKK 252
           K+ L Y Y G  I   +K ++ AL+  E+ V +PA  V    L+++KK
Sbjct: 257 KYVLDYLYNGACILIELKRFEDALFLLEICVGMPAFSVQDQHLDSFKK 304


>U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein18 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
 Frame = -1

Query: 511 DSLNESVK-----KVFVSL*IFFLYIEFKT*LTSPIFLSLTNIS 395
           D+LN++ K     K+FV L IF +Y+ +    T PI  +LT++S
Sbjct: 155 DNLNDTKKCFEGWKIFVILGIFCVYVIYPMLFTKPIIFNLTHMS 198


>Z68000-4|CAA91972.4| 1342|Caenorhabditis elegans Hypothetical
           protein F13D2.1 protein.
          Length = 1342

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = -2

Query: 684 ICCSKTHN-VSGDAYFSGL--SRNTTIPSFWLIIAYISPSSIILSMYVSA*SGPDNSTRE 514
           +C  +  N   GD Y+  +  SR++ I S +L++ ++SP  + +++ +   +       +
Sbjct: 500 VCADQGANGKKGDTYYMKVEVSRSSPIQSKYLMMKFLSPGVVNMTLTLKTENCQTGKILD 559

Query: 513 ATRSTKALKKFLSASEY 463
           A R    ++K     EY
Sbjct: 560 AVRKQIEIQKRADTEEY 576


>Z50739-4|CAA90605.4| 1342|Caenorhabditis elegans Hypothetical
           protein F13D2.1 protein.
          Length = 1342

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = -2

Query: 684 ICCSKTHN-VSGDAYFSGL--SRNTTIPSFWLIIAYISPSSIILSMYVSA*SGPDNSTRE 514
           +C  +  N   GD Y+  +  SR++ I S +L++ ++SP  + +++ +   +       +
Sbjct: 500 VCADQGANGKKGDTYYMKVEVSRSSPIQSKYLMMKFLSPGVVNMTLTLKTENCQTGKILD 559

Query: 513 ATRSTKALKKFLSASEY 463
           A R    ++K     EY
Sbjct: 560 AVRKQIEIQKRADTEEY 576


>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
           homolog protein.
          Length = 1846

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 658 NIVCLRTANGCLY*TSPVHTGNGCSDTSPSTVCEESVGSHDEDM 789
           NIV  R  +  L      + G  CS T+ +T   E++G+  EDM
Sbjct: 5   NIVRCRRRHKILENLEEENLGPSCSSTTSTTAATEALGTTTEDM 48


>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
           formation protein 2 protein.
          Length = 1843

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 658 NIVCLRTANGCLY*TSPVHTGNGCSDTSPSTVCEESVGSHDEDM 789
           NIV  R  +  L      + G  CS T+ +T   E++G+  EDM
Sbjct: 2   NIVRCRRRHKILENLEEENLGPSCSSTTSTTAATEALGTTTEDM 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,766,173
Number of Sequences: 27780
Number of extensions: 442450
Number of successful extensions: 1199
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)