Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00850
         (714 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0628 - 25643006-25643123,25643314-25643471,25643559-256436...    68   9e-12
01_05_0142 - 18564697-18564792,18564824-18564928,18565606-185656...    35   0.074
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116...    30   2.1  
08_01_0411 + 3670758-3672365                                           29   4.8  

>11_06_0628 -
           25643006-25643123,25643314-25643471,25643559-25643687,
           25644378-25644451,25644771-25644798
          Length = 168

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
 Frame = -2

Query: 683 ITGDEMFSDTYKMKLVDE-VIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXXRPSRAE* 507
           +TGDE+ SD++  + ++  +++EV G+ V +   D+ I G N              +A  
Sbjct: 8   LTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDI-GANPSAEGGGDDEGVDDQAVK 66

Query: 506 HSPEPQASRNIRFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILG 333
                   R       DKK +  ++K Y+K L AKL+    ++ E FK N+    K +LG
Sbjct: 67  VVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDA---EKQEEFKKNIEGATKYLLG 123

Query: 332 RFKELQFFTGESMDCDGMVAMMEYRD 255
           + K+LQFF GESM  DG +    Y+D
Sbjct: 124 KLKDLQFFVGESMHDDGGLVFAYYKD 149


>01_05_0142 -
           18564697-18564792,18564824-18564928,18565606-18565678,
           18566262-18567637
          Length = 549

 Score = 34.7 bits (76), Expect = 0.074
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
 Frame = +3

Query: 174 ISYLTFRISLLLDH-V*KTS*LVFAYHQVSIFHHGNHAITIHGLPSKEL----KFLKPAE 338
           IS+LT +++  L++ +      +   H+   FHH  H   ++  PSK+L    ++L+   
Sbjct: 214 ISFLTDKVAQSLENFIQYHPRAIQEAHRPKDFHHMLHLFQMYLKPSKKLVEGSQYLERGR 273

Query: 339 DVFHYFVHVCFKYFNLVRRL 398
             FH F ++C++Y  + R+L
Sbjct: 274 -YFHSFANICYRYLKIGRKL 292


>05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,
            1164082-1164240,1164663-1164797,1165116-1165268,
            1165358-1165479,1165599-1166541,1166677-1166728,
            1166873-1167963,1168058-1168384,1168479-1168559,
            1168649-1168717,1168809-1168937,1169038-1169121,
            1169210-1169275
          Length = 1321

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = -2

Query: 467  GDKKSYTL-YLKDYMKKLV-AKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQFFTGESM 294
            G +K  TL  L++Y+  +V A L+    +Q+E FK  +NKV        K L+ F+ + M
Sbjct: 1140 GSEKMVTLDNLEEYVSSIVDATLKSGISNQIEAFKAGINKVF-----ALKTLRLFSEDEM 1194

Query: 293  D 291
            +
Sbjct: 1195 E 1195


>08_01_0411 + 3670758-3672365
          Length = 535

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +1

Query: 514 ALDGRVRALVSLFSRRLKPSIWISP 588
           A +G  R  +++F+R LKP +W+ P
Sbjct: 263 AKNGCAREALAVFNRMLKPHVWVMP 287


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,075,835
Number of Sequences: 37544
Number of extensions: 323390
Number of successful extensions: 710
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)