Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00850
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    68   6e-12
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    29   4.4  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      29   4.4  
Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
 Frame = -2

Query: 692 RTFITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNXXXXXXXXXXXRPSRA 513
           +   T DE+ SD++ MKLVD+++YE  G+ V R +G+I + G N                
Sbjct: 5   KDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHV 64

Query: 512 E*HSPEPQASRNIR---FGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VEVFKTNMNKVM 348
           E         + +    + D   +  Y+K +MK ++  +E+   D+  V+ FK  +   +
Sbjct: 65  ERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWV 124

Query: 347 KDILG--RFKELQFFTGESM---DCDGMVAMMEYRDL 252
             +L   RFK L FF GE       +G VA++EYRD+
Sbjct: 125 VSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDV 161


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 354 FVHVCFKYFNLVRRLLFQFCY*FFHI 431
           F+++C +Y    RR L  FCY  F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -2

Query: 461 KKSYTLYLKDYMKKLVAKLEEK 396
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -2

Query: 461 KKSYTLYLKDYMKKLVAKLEEK 396
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -2

Query: 461 KKSYTLYLKDYMKKLVAKLEEK 396
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical
           protein ZK945.3 protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -2

Query: 464 DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 321
           +KK+  L L    +K + K+EEKA       K+ ++K +KD L R K+
Sbjct: 22  EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLKK 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,173,557
Number of Sequences: 27780
Number of extensions: 299105
Number of successful extensions: 822
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)