Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00849
         (842 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.       75   4e-15
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    26   1.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.8  

>Y09951-1|CAA71082.1|  107|Anopheles gambiae histone H2a protein.
          Length = 107

 Score = 74.5 bits (175), Expect = 4e-15
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
 Frame = +1

Query: 256 VYSAAILEYLTAEVLELAGNASKD-LKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGV 429
           VY AA++EYL AEVLELAGN ++D  K +RI PR LQLAIR DEE + L+ + TIA GGV
Sbjct: 34  VYLAAVMEYLAAEVLELAGNRARDNKKERRIIPR-LQLAIRNDEEENKLLRRVTIAQGGV 92

Query: 430 IPHIHKSLIGKK 465
           +P+I   L+ K+
Sbjct: 93  LPNIQAVLLPKR 104



 Score = 28.3 bits (60), Expect = 0.31
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +2

Query: 176 LQFPVGRIHRHLKNRTTSHGRVGATAEFIL 265
           LQFPVGRIHR L+    +  RVG  A   L
Sbjct: 8   LQFPVGRIHRLLRKGNYAE-RVGPGAPVYL 36


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 407 QLSLAEASSHTYTNLSLERKAVLVHPFNF 493
           Q+ +  AS++    LS++R   + HP NF
Sbjct: 306 QVCVTYASTYVLVALSIDRYDAITHPMNF 334


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 537  DGRYQMQYNLSSHNLKLN 484
            DG+Y+  Y+   HNL L+
Sbjct: 1802 DGKYKRSYSYEPHNLLLS 1819


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,243
Number of Sequences: 2352
Number of extensions: 17034
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)