Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00848
(713 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL392104-6|CAI40179.2| 932|Homo sapiens likely orthologue of Mu... 27 0.82
AL353583-3|CAI12211.2| 932|Homo sapiens likely orthologue of Mu... 27 0.82
BC018764-1|AAH18764.1| 877|Homo sapiens KIAA1217 protein protein. 27 0.82
AY960861-1|AAX57561.1| 117|Homo sapiens anti-oxLDL immunoglobul... 31 4.1
BC098577-1|AAH98577.1| 866|Homo sapiens KIAA1217 protein protein. 31 5.4
AL392104-10|CAI40182.1| 1264|Homo sapiens likely orthologue of M... 31 5.4
AL392104-4|CAO03477.1| 866|Homo sapiens likely orthologue of Mu... 31 5.4
AL356113-1|CAI14084.1| 1264|Homo sapiens likely orthologue of Mu... 31 5.4
AL353583-5|CAI12212.1| 1264|Homo sapiens likely orthologue of Mu... 31 5.4
AL353583-1|CAO03598.1| 866|Homo sapiens likely orthologue of Mu... 31 5.4
AL157473-1|CAB75668.1| 420|Homo sapiens hypothetical protein pr... 31 5.4
AB033043-1|BAA86531.2| 1339|Homo sapiens KIAA1217 protein protein. 31 5.4
BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligas... 30 7.2
BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligas... 30 7.2
AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3 alp... 30 7.2
AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein. 30 7.2
AY393020-1|AAS85958.1| 175|Homo sapiens immunoglobulin heavy ch... 30 9.5
>AL392104-6|CAI40179.2| 932|Homo sapiens likely orthologue of Mus
musculus enhancer trap locus 4 protein.
Length = 932
Score = 27.5 bits (58), Expect(2) = 0.82
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQ 428
R +KYP P+ WT + PVT+ ++ + G + LQ
Sbjct: 778 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQ 821
Score = 24.6 bits (51), Expect(2) = 0.82
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 405 RSVSGALQTSPGLSTPPKTRRCLRIF*KF*RHSKSERELVKRAYTMEPGTNCPQT*R 575
R+ S T G + PPK ++ L F + R S E E + + + PQT R
Sbjct: 841 RADSHVKDTRSGATVPPKEKKNLEFFHEDVRKSDVEYENGPQMEFQKGSSGAPQTSR 897
>AL353583-3|CAI12211.2| 932|Homo sapiens likely orthologue of Mus
musculus enhancer trap locus 4 protein.
Length = 932
Score = 27.5 bits (58), Expect(2) = 0.82
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQ 428
R +KYP P+ WT + PVT+ ++ + G + LQ
Sbjct: 778 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQ 821
Score = 24.6 bits (51), Expect(2) = 0.82
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 405 RSVSGALQTSPGLSTPPKTRRCLRIF*KF*RHSKSERELVKRAYTMEPGTNCPQT*R 575
R+ S T G + PPK ++ L F + R S E E + + + PQT R
Sbjct: 841 RADSHVKDTRSGATVPPKEKKNLEFFHEDVRKSDVEYENGPQMEFQKGSSGAPQTSR 897
>BC018764-1|AAH18764.1| 877|Homo sapiens KIAA1217 protein protein.
Length = 877
Score = 27.5 bits (58), Expect(2) = 0.82
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQ 428
R +KYP P+ WT + PVT+ ++ + G + LQ
Sbjct: 723 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQ 766
Score = 24.6 bits (51), Expect(2) = 0.82
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 405 RSVSGALQTSPGLSTPPKTRRCLRIF*KF*RHSKSERELVKRAYTMEPGTNCPQT*R 575
R+ S T G + PPK ++ L F + R S E E + + + PQT R
Sbjct: 786 RADSHVKDTRSGATVPPKEKKNLEFFHEDVRKSDVEYENGPQMEFQKGSSGAPQTSR 842
>AY960861-1|AAX57561.1| 117|Homo sapiens anti-oxLDL immunoglobulin
heavy chain variable region protein.
Length = 117
Score = 31.1 bits (67), Expect = 4.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 141 MYHLVKIPIGRGLVHHVDYWGEGKVTNL 224
+Y+ +I G G H+DYWG+G + +
Sbjct: 88 VYYCARIHYGSGSSPHIDYWGQGTLVTV 115
>BC098577-1|AAH98577.1| 866|Homo sapiens KIAA1217 protein protein.
Length = 866
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKTRR 467
R +KYP P+ WT + PVT+ ++ + G + LQ S G P+T R
Sbjct: 778 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSG---APQTSR 831
>AL392104-10|CAI40182.1| 1264|Homo sapiens likely orthologue of Mus
musculus enhancer trap locus 4 protein.
Length = 1264
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKTRR 467
R +KYP P+ WT + PVT+ ++ + G + LQ S G P+T R
Sbjct: 1015 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSG---APQTSR 1068
>AL392104-4|CAO03477.1| 866|Homo sapiens likely orthologue of Mus
musculus enhancer trap locus 4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKTRR 467
R +KYP P+ WT + PVT+ ++ + G + LQ S G P+T R
Sbjct: 778 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSG---APQTSR 831
>AL356113-1|CAI14084.1| 1264|Homo sapiens likely orthologue of Mus
musculus enhancer trap locus 4 protein.
Length = 1264
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKTRR 467
R +KYP P+ WT + PVT+ ++ + G + LQ S G P+T R
Sbjct: 1015 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSG---APQTSR 1068
>AL353583-5|CAI12212.1| 1264|Homo sapiens likely orthologue of Mus
musculus enhancer trap locus 4 protein.
Length = 1264
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKTRR 467
R +KYP P+ WT + PVT+ ++ + G + LQ S G P+T R
Sbjct: 1015 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSG---APQTSR 1068
>AL353583-1|CAO03598.1| 866|Homo sapiens likely orthologue of Mus
musculus enhancer trap locus 4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKTRR 467
R +KYP P+ WT + PVT+ ++ + G + LQ S G P+T R
Sbjct: 778 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSG---APQTSR 831
>AL157473-1|CAB75668.1| 420|Homo sapiens hypothetical protein
protein.
Length = 420
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKTRR 467
R +KYP P+ WT + PVT+ ++ + G + LQ S G P+T R
Sbjct: 171 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSG---APQTSR 224
>AB033043-1|BAA86531.2| 1339|Homo sapiens KIAA1217 protein protein.
Length = 1339
Score = 30.7 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 297 RESKYPTGFPSCLWTTATLPVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKTRR 467
R +KYP P+ WT + PVT+ ++ + G + LQ S G P+T R
Sbjct: 1090 RATKYPAEEPASAWTPSPPPVTTSSSKDEEEEEEEGDKIMAELQGSSG---APQTSR 1143
>BC113507-1|AAI13508.1| 1749|Homo sapiens ubiquitin protein ligase E3
component n-recognin 1 protein.
Length = 1749
Score = 30.3 bits (65), Expect = 7.2
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -3
Query: 288 PLLTSANCSFTCSSDESLLPCQG*SLFLLPSNRR--GVPALYQ 166
P+LT + C+FT + E+LL +G LF NR+ G+ AL Q
Sbjct: 1318 PMLTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQ 1360
>BC113505-1|AAI13506.1| 1749|Homo sapiens ubiquitin protein ligase E3
component n-recognin 1 protein.
Length = 1749
Score = 30.3 bits (65), Expect = 7.2
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -3
Query: 288 PLLTSANCSFTCSSDESLLPCQG*SLFLLPSNRR--GVPALYQ 166
P+LT + C+FT + E+LL +G LF NR+ G+ AL Q
Sbjct: 1318 PMLTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQ 1360
>AY061886-1|AAL32103.1| 1749|Homo sapiens ubiquitin ligase E3 alpha-I
protein.
Length = 1749
Score = 30.3 bits (65), Expect = 7.2
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -3
Query: 288 PLLTSANCSFTCSSDESLLPCQG*SLFLLPSNRR--GVPALYQ 166
P+LT + C+FT + E+LL +G LF NR+ G+ AL Q
Sbjct: 1318 PMLTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQ 1360
>AF525401-1|AAO14997.1| 1709|Homo sapiens UBR1 E3a ligase protein.
Length = 1709
Score = 30.3 bits (65), Expect = 7.2
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -3
Query: 288 PLLTSANCSFTCSSDESLLPCQG*SLFLLPSNRR--GVPALYQ 166
P+LT + C+FT + E+LL +G LF NR+ G+ AL Q
Sbjct: 1301 PMLTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQ 1343
>AY393020-1|AAS85958.1| 175|Homo sapiens immunoglobulin heavy chain
protein.
Length = 175
Score = 29.9 bits (64), Expect = 9.5
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +3
Query: 141 MYHLVKIPIGRGLVHHVDYWGEGKVTNL 224
+Y+ + +G G V++ DYWG+G + +
Sbjct: 89 VYYCARDSLGYGYVYYFDYWGQGTLVTV 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,049,285
Number of Sequences: 237096
Number of extensions: 2712049
Number of successful extensions: 7712
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7712
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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