Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00847
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 94 1e-19
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 77 2e-14
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 67 1e-11
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 33 0.19
07_03_1414 - 26403361-26403969 33 0.19
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 33 0.19
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 33 0.19
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 33 0.25
07_03_1422 + 26462871-26463434,26463772-26463897 32 0.44
07_03_1413 - 26396426-26396890 32 0.44
03_03_0260 - 15946321-15946431,15946651-15946716,15947601-15947891 32 0.58
08_02_1023 - 23710825-23710950,23711037-23711120,23711367-237114... 29 4.1
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128... 28 7.1
04_04_0188 - 23433753-23436572 28 9.4
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 93.9 bits (223), Expect = 1e-19
Identities = 60/159 (37%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Frame = +1
Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIHARRLYFSVV*KCPLRSTNLPRHWT 327
NPLFEKRPK F IG + P +DL RFV+WPK +RI +R K P R
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 81
Query: 328 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPIPSDPAQTQSPSWS 504
+ L F + ++ + PI
Sbjct: 82 KNLATNLFKMLLK--YRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLI 139
Query: 505 RKEGALVV-IAHDVDPIELVLFLPALCRKMGVPYCIVKG 618
+ A +V IAHDVDPIELV++LPALCRKM VPYCIVKG
Sbjct: 140 EQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKG 178
Score = 64.1 bits (149), Expect = 1e-10
Identities = 37/101 (36%), Positives = 52/101 (51%)
Frame = +3
Query: 213 LVQICKMAQVYPHPRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 392
L + K +V RQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 44 LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE-DKAA 102
Query: 393 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVEKRR 515
+P ++ G N VT L+E+ +
Sbjct: 103 KKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSK 143
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/50 (50%), Positives = 41/50 (82%)
Frame = +2
Query: 614 RGXSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELR 763
+G +RLG++VH+KT + L LT V++ D+ FSK++EAIK NFN++++E+R
Sbjct: 177 KGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVR 226
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 76.6 bits (180), Expect = 2e-14
Identities = 52/152 (34%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Frame = +1
Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIHARRLYFSVV*KCPLRSTNLPRHWT 327
NPLFEKRPK F IG + P +DL RFV+WPK +RI +R K P R
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLD 65
Query: 328 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPIPSDPAQTQSPSWS 504
+ L F + ++ + PI
Sbjct: 66 KNLATNLFKMLLK--YRPEDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLI 123
Query: 505 RKEGALVV-IAHDVDPIELVLFLPALCRKMGV 597
+ A +V IAHDVDPIELV++LPALCRKM +
Sbjct: 124 EQSKAQLVVIAHDVDPIELVVWLPALCRKMEI 155
Score = 64.1 bits (149), Expect = 1e-10
Identities = 37/101 (36%), Positives = 52/101 (51%)
Frame = +3
Query: 213 LVQICKMAQVYPHPRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 392
L + K +V RQ+ +L++RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 28 LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE-DKAA 86
Query: 393 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVEKRR 515
+P ++ G N VT L+E+ +
Sbjct: 87 KKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSK 127
Score = 54.4 bits (125), Expect = 9e-08
Identities = 21/42 (50%), Positives = 34/42 (80%)
Frame = +2
Query: 638 LVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELR 763
+VH+KT + L LT V++ D+ FSK++EAIK NFN++++E+R
Sbjct: 155 IVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVR 196
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +1
Query: 505 RKEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKG 618
+ + LVVIAHDVDPIELV++LPALCRKM +PYCIVKG
Sbjct: 126 QSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 163
Score = 64.5 bits (150), Expect = 9e-11
Identities = 25/50 (50%), Positives = 42/50 (84%)
Frame = +2
Query: 614 RGXSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEELR 763
+G +RLG++VH+KT + L LT V++ D+ FSK++EAIK+NFN++++E+R
Sbjct: 162 KGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKSNFNDKFDEVR 211
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +1
Query: 148 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIHARR 264
NPLFEKRPK F IG + P +DL RFVRWPK +RI +R
Sbjct: 23 NPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQR 61
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +3
Query: 255 RQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 377
RQ+ VL++RLKVPP +NQFT+TLDK ++L++ + E
Sbjct: 59 RQRRVLKQRLKVPPALNQFTRTLDKNLGCQKERLLKRAQAE 99
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 478 AQTQSPSWSRKEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 612
A + + +R VV+A D +P+E++L LP L VPY V
Sbjct: 37 ANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPYVFV 81
>07_03_1414 - 26403361-26403969
Length = 202
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = -2
Query: 276 AEVQPSGVDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 118
A +P+ + A + P + G++ + + +T G+ L P LEE + GL L+D
Sbjct: 70 AATKPTALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 505 RKEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 612
R + L +IA ++ PI+++ +P LC + +PY V
Sbjct: 58 RGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYV 93
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 478 AQTQSPSWSRKEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 612
A + + +R VV+A D +P+E++L LP L VPY V
Sbjct: 39 ANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFV 83
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 505 RKEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 612
R L VIA ++ PI+++ +P LC + +PY V
Sbjct: 58 RGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYV 93
>07_03_1422 + 26462871-26463434,26463772-26463897
Length = 229
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 276 AEVQPSGVDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 118
A +P+ + + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 68 AATKPTALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120
>07_03_1413 - 26396426-26396890
Length = 154
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 276 AEVQPSGVDADILGPSYKSGQVTSWLNALTNGKVLWPLLEERIHDLLGLNLFD 118
A +P+ + + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 22 AATKPTALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74
>03_03_0260 - 15946321-15946431,15946651-15946716,15947601-15947891
Length = 155
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -1
Query: 271 STAFWRGCGYTWAILQIWTSHELAECPDQWQSSLASSRREDSRSSWAQP 125
S +WRGCGY +I T+ A C +W+SS R+ S +P
Sbjct: 19 SKRWWRGCGYGRCSGEIHTAAHQAHC-GRWRSSGPQRRQRRDGGSLMKP 66
>08_02_1023 -
23710825-23710950,23711037-23711120,23711367-23711492,
23711593-23711712,23712046-23712153,23712243-23712395,
23712505-23712600,23712716-23712800,23713278-23714268,
23714870-23714915,23715806-23715964,23716516-23716651,
23716734-23716900,23717366-23717696,23717827-23718062,
23718326-23718514
Length = 1050
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/67 (22%), Positives = 36/67 (53%)
Frame = +2
Query: 560 SFSCQRYAVKWAYHTALSRGXSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNF 739
SFS YA+KW ++ L + V+++ L + ++ + R FS++ + +T++
Sbjct: 475 SFSQDTYALKWTFNNDL----GLVFVAVYQRMLHLLYVDDLLAAVRKEFSQIYDPKRTSY 530
Query: 740 NERYEEL 760
++ + E+
Sbjct: 531 DDAFNEV 537
>02_04_0587 +
24110333-24110584,24111193-24111261,24112347-24112850,
24113094-24113336
Length = 355
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 193 PDQWQSSLASSRREDSRSSWAQPF*PPMGRR 101
P SSLA +RR +R AQP PP RR
Sbjct: 24 PSSAASSLAFARRAAARPLRAQPLLPPAARR 54
>04_04_0188 - 23433753-23436572
Length = 939
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 198 SANS*LVQICKMAQVYPHPRQKAVLQRRLKVPPPINQFTQTLD 326
SA + L Q+CK + RQ A R + PPP + + LD
Sbjct: 21 SAGASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLD 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,582,350
Number of Sequences: 37544
Number of extensions: 447359
Number of successful extensions: 1239
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1239
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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