Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00841
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.5  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 316 FSAMHCHFTFHL 351
           F   HCHF FH+
Sbjct: 666 FWLFHCHFLFHI 677


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 52  FTTKAYIDLNLQL*KHKHNALIK 120
           FT   YID+NLQ    K + L+K
Sbjct: 113 FTNLQYIDINLQNKGKKESKLMK 135


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 328 HCHFTFHL 351
           HCHF FH+
Sbjct: 670 HCHFLFHI 677


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -2

Query: 660 LFYDFTNKSYK*FATVNLNYIGGPRLGTLDSNLYIGAYYTSVRF--DMRPMQR--YPCYS 493
           LFY +       ++ ++L+Y+ GP +  + S   +  Y ++      +R   R  YP Y 
Sbjct: 19  LFYCYKTIKQHIYSLISLSYLPGPPVNDIISGNILPLYTSAENIFKQLREWGRLYYPIYK 78

Query: 492 L 490
           L
Sbjct: 79  L 79


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 264 EWFNSRRETTHVSNVVLAFFVSVKAMN 184
           E FN +R+  +  ++   FFVS K  N
Sbjct: 213 EIFNGKRKNPNGCDIKATFFVSHKYTN 239


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 286 ADIKWLCRLCFSAMH 330
           AD+ ++C +C S +H
Sbjct: 644 ADVFYICHVCCSTIH 658



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -2

Query: 501 CYSLVSNFTHRSSSFKALVIDRTSTEYVAGLNVNYSLCRII*SSYIRRVPE 349
           C  L+   T    +  +L+I  +++ YVA + +N  + R     +IR+V E
Sbjct: 424 CELLIEGTTSILINVPSLIIHVSTSAYVATVWINSVINRWKFIEFIRKVLE 474


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 268 DYYQLLADIKWLCRLCFSAMHC 333
           D  QL+ D    C+L F   HC
Sbjct: 314 DCVQLVNDYHCNCKLGFMGRHC 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,939
Number of Sequences: 336
Number of extensions: 3897
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)