Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00841
         (790 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0380 + 22937941-22937984,22939375-22941481                       32   0.60 
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876...    31   1.0  
06_03_0803 + 24737115-24737366,24738921-24739004,24739152-247392...    30   1.8  
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157...    29   3.2  

>11_06_0380 + 22937941-22937984,22939375-22941481
          Length = 716

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +1

Query: 265 QDYYQLLADIKWLCRLCFSAMHCHFTFHLRH 357
           +D ++L+A + W   LC+ A++C  TFH++H
Sbjct: 650 RDRWELIAAV-WTEILCYMALNCGATFHVKH 679


>03_02_0476 +
           8768182-8768313,8768734-8768833,8768949-8768986,
           8769102-8769191,8769465-8769695
          Length = 196

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +1

Query: 277 QLLADIKWLCRLCFSAMHCHFTFHLRHPSNIAGLDYPTETIVNIKPSY--IFSAGSVYNK 450
           QL  D     R CF   HC  T  L + S+I G+ Y        KP +  +F     YNK
Sbjct: 21  QLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPY-------CKPHFEQLFKETGSYNK 73

Query: 451 SFK 459
           SF+
Sbjct: 74  SFQ 76


>06_03_0803 +
           24737115-24737366,24738921-24739004,24739152-24739255,
           24739321-24739445,24739549-24739707,24740120-24740237,
           24740317-24740851,24740948-24741042,24741153-24741431,
           24741478-24741592,24741669-24741855,24741934-24742490
          Length = 869

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 352 RHPSNIAGLDYPTETIVNIKPSY 420
           R PS+ A L+YP+ TI N+K SY
Sbjct: 760 RAPSSAAALNYPSITIPNLKKSY 782


>04_03_0867 -
           20414999-20415160,20415255-20415384,20415515-20415702,
           20415967-20416001,20416363-20416579,20416737-20416820,
           20417609-20417875,20417954-20418061,20418163-20418249,
           20418629-20419399
          Length = 682

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +1

Query: 43  IQYFTTKAYIDLNLQL*KHKHNALI-KFHRCNF*ITSLLLPCATRSCVIHCFYAYEKS*N 219
           I  F     +DL   L K K  A I +  R  + I  LL+ CA    V   F+  E    
Sbjct: 340 ISRFQNLVIVDLKNNLSKKKMKAFIPQVVRTTY-IGGLLVLCAGSIAVSGTFFDGE---G 395

Query: 220 YIGYMRRFTPAVEPFQDY 273
           ++ ++   T A+EP QD+
Sbjct: 396 FLSFLTALTLAIEPIQDF 413


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,911,256
Number of Sequences: 37544
Number of extensions: 383970
Number of successful extensions: 744
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)