Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00838
         (700 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1023 + 8840754-8842988,8843189-8843362                           29   3.5  
01_06_1224 - 35508842-35510404                                         29   4.7  

>07_01_1023 + 8840754-8842988,8843189-8843362
          Length = 802

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 183 ANNGIELNNRFGDDASEKIPLKNLANFQNLKLQLNYP 293
           ANN   L+ RF +DA+  IP +NL++      Q N P
Sbjct: 508 ANND-PLSRRFSEDANRNIPTRNLSDKTKNNAQSNRP 543


>01_06_1224 - 35508842-35510404
          Length = 520

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 236 DTPQEPRKLPEFKIATQLPKDAEFSLFLPKHQEMANELLG 355
           +T   P   P   + ++LP D EF L  P     A+ELLG
Sbjct: 53  ETHLPPYAPPPAPVVSELPDDLEFGLHPPPPLVRASELLG 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,915,305
Number of Sequences: 37544
Number of extensions: 353973
Number of successful extensions: 832
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)