Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00838
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p... 31 1.0
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical p... 31 1.0
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p... 31 1.0
U41528-6|AAK39169.3| 424|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81091-6|CAE17821.2| 306|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z75952-8|CAH10792.1| 306|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70757-2|CAA94798.1| 611|Caenorhabditis elegans Hypothetical pr... 27 9.8
AY954525-1|AAX34433.1| 611|Caenorhabditis elegans anion transpo... 27 9.8
AY887917-1|AAX34429.1| 611|Caenorhabditis elegans anion transpo... 27 9.8
AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 614 GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGN-TSENS 501
G + +RG G T + A + W+S NLE N T++NS
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANSTTDNS 1194
>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical protein
T04A11.3 protein.
Length = 1014
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 614 GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGN-TSENS 501
G + +RG G T + A + W+S NLE N T++NS
Sbjct: 962 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANSTTDNS 1000
>Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical
protein T09E11.4 protein.
Length = 671
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 368 VPENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNFQKYFPLNSWIPKY 547
+ EN L+ + C + NL FN C +A K+++K + + L + P Y
Sbjct: 447 IAENHLKMFIQECGYRSYNLRAYTFNGCEPLAAFETEPHCKIQLKEYDSF--LKNTQPDY 504
Query: 548 S 550
+
Sbjct: 505 A 505
>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
protein C25G4.10 protein.
Length = 1208
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 614 GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGN-TSENS 501
G + +RG G T + A + W+S NLE N T++NS
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANSTTDNS 1194
>U41528-6|AAK39169.3| 424|Caenorhabditis elegans Hypothetical
protein C15C7.6 protein.
Length = 424
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 440 FNYCYSVALMHRRDTRKVRVKNFQKYFPLNSWIPK 544
FN Y + + R+ + +R K F +YFP+ SW+ K
Sbjct: 56 FNITYMIEMTCRK--QNMRQKRFTEYFPVLSWLLK 88
>AL032654-1|CAA21717.2| 179|Caenorhabditis elegans Hypothetical
protein Y52B11A.1 protein.
Length = 179
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 385 TRFAIDMRLCTSKPEPSVVQLLLL 456
TRF I MR TSK EP++ +LL L
Sbjct: 96 TRFIISMRDFTSKEEPTLSELLNL 119
>Z81091-6|CAE17821.2| 306|Caenorhabditis elegans Hypothetical
protein F55H12.6a protein.
Length = 306
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 452 YSVALMHRRDTRKVRVKNFQKYFPLNSWIPKYSLKLVK 565
Y + + RRD +V +KN K +P+ +I L +
Sbjct: 83 YCLKIHSRRDNARVHIKNHHKDYPVRDFIKDIDASLAE 120
>Z75952-8|CAH10792.1| 306|Caenorhabditis elegans Hypothetical
protein F55H12.6a protein.
Length = 306
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 452 YSVALMHRRDTRKVRVKNFQKYFPLNSWIPKYSLKLVK 565
Y + + RRD +V +KN K +P+ +I L +
Sbjct: 83 YCLKIHSRRDNARVHIKNHHKDYPVRDFIKDIDASLAE 120
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 373 WYIHENAKKFICHFLMFR*K**EFSVLG 290
WY + KK +CHFL R K F V G
Sbjct: 1157 WYNVRSVKKNLCHFLRLRHKFMHFFVKG 1184
>Z70757-2|CAA94798.1| 611|Caenorhabditis elegans Hypothetical
protein ZK287.2 protein.
Length = 611
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 500 KNFQKYFPLNSWIPKYSLK 556
K QKY P+ W+P Y K
Sbjct: 26 KKLQKYIPILEWLPNYQWK 44
>AY954525-1|AAX34433.1| 611|Caenorhabditis elegans anion
transporter SULP-8a protein.
Length = 611
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 500 KNFQKYFPLNSWIPKYSLK 556
K QKY P+ W+P Y K
Sbjct: 26 KKLQKYIPILEWLPNYQWK 44
>AY887917-1|AAX34429.1| 611|Caenorhabditis elegans anion
transporter SULP-8b protein.
Length = 611
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 500 KNFQKYFPLNSWIPKYSLK 556
K QKY P+ W+P Y K
Sbjct: 26 KKLQKYIPILEWLPNYQWK 44
>AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical
protein Y57G7A.5 protein.
Length = 244
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 284 QLPKDAEFSLFLPKHQEMANELLGVLM-DVPENELQDLLST 403
QLP F + Q++ ++ G++M D+P +LQD L T
Sbjct: 197 QLPNCDHFPNLMNPVQKLGEKVTGMVMKDLPAKKLQDFLDT 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,911,560
Number of Sequences: 27780
Number of extensions: 328683
Number of successful extensions: 842
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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