Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00837X
         (568 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC106066-1|AAI06067.1|  226|Homo sapiens SPCS2 protein protein.        65   1e-10
BC064957-1|AAH64957.1|  226|Homo sapiens SPCS2 protein protein.        65   1e-10
D14658-1|BAA03492.1|  123|Homo sapiens KIAA0102 protein.               56   1e-07
CR542243-1|CAG47039.1|  123|Homo sapiens KIAA0102 protein.             56   1e-07
CR542233-1|CAG47029.1|  123|Homo sapiens KIAA0102 protein.             56   1e-07
BC082231-1|AAH82231.2|  123|Homo sapiens signal peptidase comple...    56   1e-07
BC070276-1|AAH70276.2|  123|Homo sapiens signal peptidase comple...    56   1e-07
BC008063-1|AAH08063.3|  123|Homo sapiens signal peptidase comple...    56   1e-07
U62739-1|AAB53087.1|  352|Homo sapiens branched-chain amino acid...    29   8.6  

>BC106066-1|AAI06067.1|  226|Homo sapiens SPCS2 protein protein.
          Length = 226

 Score = 65.3 bits (152), Expect = 1e-10
 Identities = 24/37 (64%), Positives = 34/37 (91%)
 Frame = +3

Query: 294 WDYLYPFPQSRLVLIICVSSYFILMGILTLYTTFKEK 404
           WDY++PFP+S+ VL +CV SYF++MGILT+YT++KEK
Sbjct: 101 WDYMHPFPESKPVLALCVISYFVMMGILTIYTSYKEK 137



 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
 Frame = +1

Query: 133 KINKWDGAAAKNAVDDAIREVMTGDLKCKESFALIDGRXXXXXXXXXXXXTHCYGIIFIH 312
           KI+KWDG+A KN++DD+ ++V+    K  E+F LIDGR                   ++H
Sbjct: 47  KIDKWDGSAVKNSLDDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIW-DYMH 105

Query: 313 SLNQDWF*SSACHHISY*WVF*PSTLHS--KRRGIFVVA--KEKVG-NNTRVWEASSYVK 477
              +     + C  ISY  +    T+++  K + IF+VA  K+  G +   +W+ SS +K
Sbjct: 106 PFPESKPVLALC-VISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLK 164

Query: 478 KHDDKYNL 501
           + DDKY L
Sbjct: 165 RFDDKYTL 172


>BC064957-1|AAH64957.1|  226|Homo sapiens SPCS2 protein protein.
          Length = 226

 Score = 65.3 bits (152), Expect = 1e-10
 Identities = 24/37 (64%), Positives = 34/37 (91%)
 Frame = +3

Query: 294 WDYLYPFPQSRLVLIICVSSYFILMGILTLYTTFKEK 404
           WDY++PFP+S+ VL +CV SYF++MGILT+YT++KEK
Sbjct: 101 WDYMHPFPESKPVLALCVISYFVMMGILTIYTSYKEK 137



 Score = 59.7 bits (138), Expect = 7e-09
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
 Frame = +1

Query: 133 KINKWDGAAAKNAVDDAIREVMTGDLKCKESFALIDGRXXXXXXXXXXXXTHCYGIIFIH 312
           KI+KWDG+A KN++DD++++V+    K  E+F LIDGR                   ++H
Sbjct: 47  KIDKWDGSAVKNSLDDSVKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIW-DYMH 105

Query: 313 SLNQDWF*SSACHHISY*WVF*PSTLHS--KRRGIFVVA--KEKVG-NNTRVWEASSYVK 477
              +     + C  ISY  +    T+++  K + IF+VA  K+  G +   +W+ SS +K
Sbjct: 106 PFPESKPVLALC-VISYFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLK 164

Query: 478 KHDDKYNL 501
           + DDKY L
Sbjct: 165 RFDDKYTL 172


>D14658-1|BAA03492.1|  123|Homo sapiens KIAA0102 protein.
          Length = 123

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 21/34 (61%), Positives = 31/34 (91%)
 Frame = +3

Query: 303 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEK 404
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEK 34



 Score = 30.7 bits (66), Expect = 3.7
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +1

Query: 397 KRRGIFVVA--KEKVGNNTR-VWEASSYVKKHDDKYNL 501
           K + IF+VA  K+  G +   +W+ SS +K+ DDKY L
Sbjct: 32  KEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTL 69


>CR542243-1|CAG47039.1|  123|Homo sapiens KIAA0102 protein.
          Length = 123

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 21/34 (61%), Positives = 31/34 (91%)
 Frame = +3

Query: 303 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEK 404
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEK 34



 Score = 30.7 bits (66), Expect = 3.7
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +1

Query: 397 KRRGIFVVA--KEKVGNNTR-VWEASSYVKKHDDKYNL 501
           K + IF+VA  K+  G +   +W+ SS +K+ DDKY L
Sbjct: 32  KEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTL 69


>CR542233-1|CAG47029.1|  123|Homo sapiens KIAA0102 protein.
          Length = 123

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 21/34 (61%), Positives = 31/34 (91%)
 Frame = +3

Query: 303 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEK 404
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEK 34



 Score = 30.7 bits (66), Expect = 3.7
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +1

Query: 397 KRRGIFVVA--KEKVGNNTR-VWEASSYVKKHDDKYNL 501
           K + IF+VA  K+  G +   +W+ SS +K+ DDKY L
Sbjct: 32  KEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTL 69


>BC082231-1|AAH82231.2|  123|Homo sapiens signal peptidase complex
           subunit 2 homolog (S. cerevisiae) protein.
          Length = 123

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 21/34 (61%), Positives = 31/34 (91%)
 Frame = +3

Query: 303 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEK 404
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEK 34



 Score = 30.7 bits (66), Expect = 3.7
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +1

Query: 397 KRRGIFVVA--KEKVGNNTR-VWEASSYVKKHDDKYNL 501
           K + IF+VA  K+  G +   +W+ SS +K+ DDKY L
Sbjct: 32  KEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTL 69


>BC070276-1|AAH70276.2|  123|Homo sapiens signal peptidase complex
           subunit 2 homolog (S. cerevisiae) protein.
          Length = 123

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 21/34 (61%), Positives = 31/34 (91%)
 Frame = +3

Query: 303 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEK 404
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEK 34



 Score = 30.7 bits (66), Expect = 3.7
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +1

Query: 397 KRRGIFVVA--KEKVGNNTR-VWEASSYVKKHDDKYNL 501
           K + IF+VA  K+  G +   +W+ SS +K+ DDKY L
Sbjct: 32  KEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTL 69


>BC008063-1|AAH08063.3|  123|Homo sapiens signal peptidase complex
           subunit 2 homolog (S. cerevisiae) protein.
          Length = 123

 Score = 55.6 bits (128), Expect = 1e-07
 Identities = 21/34 (61%), Positives = 31/34 (91%)
 Frame = +3

Query: 303 LYPFPQSRLVLIICVSSYFILMGILTLYTTFKEK 404
           ++PFP+S+ VL +CV SYF++MGILT+YT++KEK
Sbjct: 1   MHPFPESKPVLALCVISYFVMMGILTIYTSYKEK 34



 Score = 30.7 bits (66), Expect = 3.7
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +1

Query: 397 KRRGIFVVA--KEKVGNNTR-VWEASSYVKKHDDKYNL 501
           K + IF+VA  K+  G +   +W+ SS +K+ DDKY L
Sbjct: 32  KEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTL 69


>U62739-1|AAB53087.1|  352|Homo sapiens branched-chain amino acid
           aminotransferase protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 529 LPFVSRIQLRDCIYRRVSLHKNWLP 455
           LP   +++L +CI R + L K+W+P
Sbjct: 96  LPSFDKLELLECIRRLIELDKDWVP 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,599,400
Number of Sequences: 237096
Number of extensions: 1645770
Number of successful extensions: 2796
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2795
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)