Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00837X
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094832-1|AAM11185.1|  199|Drosophila melanogaster LD42119p pro...    68   8e-12
AE014298-1630|AAF48051.1|  199|Drosophila melanogaster CG1751-PA...    68   8e-12
AE013599-1473|AAF58519.3|  396|Drosophila melanogaster CG13158-P...    28   7.7  

>AY094832-1|AAM11185.1|  199|Drosophila melanogaster LD42119p
           protein.
          Length = 199

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
 Frame = +1

Query: 124 EAAKINKWDGAAAKNAVDDAIREVMTGDL-KCKESFALIDGR-XXXXXXXXXXXXTHCYG 297
           E  K+NKWDG+A K+A+DDA++  + GD  + KE F L++ R              H + 
Sbjct: 13  ELVKVNKWDGSAVKHALDDAVKTCLLGDRPQLKEQFGLVNTRLALCALAVSVAIMAHAWD 72

Query: 298 IIFIHSLNQDWF*SSACHHISY*WVF*PSTLHS--KRRGIFVVAKEKVGNNTRVWEASSY 471
                  ++     S   + +   +    TLHS  + +G F VA +K     R+WEASS 
Sbjct: 73  FTHPFPESRPVLLFSVLAYFALLGIL---TLHSSFREKGTFAVALQKDKERERLWEASSD 129

Query: 472 VKKHDDKYNLVI 507
           ++K+DDKY L +
Sbjct: 130 MRKYDDKYLLTL 141



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +3

Query: 294 WDYLYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGHLC-GSQGEGWK*HQGLGSQFL 470
           WD+ +PFP+SR VL+  V +YF L+GILTL+++F+EKG      Q +  +      S  +
Sbjct: 71  WDFTHPFPESRPVLLFSVLAYFALLGILTLHSSFREKGTFAVALQKDKERERLWEASSDM 130

Query: 471 CKETRR*IQSRNCMRDT-NGNTREASVTKSVA 563
            K   + + + + +RDT NG  RE S  KS A
Sbjct: 131 RKYDDKYLLTLS-VRDTKNGKRREQSSNKSCA 161


>AE014298-1630|AAF48051.1|  199|Drosophila melanogaster CG1751-PA
           protein.
          Length = 199

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
 Frame = +1

Query: 124 EAAKINKWDGAAAKNAVDDAIREVMTGDL-KCKESFALIDGR-XXXXXXXXXXXXTHCYG 297
           E  K+NKWDG+A K+A+DDA++  + GD  + KE F L++ R              H + 
Sbjct: 13  ELVKVNKWDGSAVKHALDDAVKTCLLGDRPQLKEQFGLVNTRLALCALAVSVAIMAHAWD 72

Query: 298 IIFIHSLNQDWF*SSACHHISY*WVF*PSTLHS--KRRGIFVVAKEKVGNNTRVWEASSY 471
                  ++     S   + +   +    TLHS  + +G F VA +K     R+WEASS 
Sbjct: 73  FTHPFPESRPVLLFSVLAYFALLGIL---TLHSSFREKGTFAVALQKDKERERLWEASSD 129

Query: 472 VKKHDDKYNLVI 507
           ++K+DDKY L +
Sbjct: 130 MRKYDDKYLLTL 141



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +3

Query: 294 WDYLYPFPQSRLVLIICVSSYFILMGILTLYTTFKEKGHLC-GSQGEGWK*HQGLGSQFL 470
           WD+ +PFP+SR VL+  V +YF L+GILTL+++F+EKG      Q +  +      S  +
Sbjct: 71  WDFTHPFPESRPVLLFSVLAYFALLGILTLHSSFREKGTFAVALQKDKERERLWEASSDM 130

Query: 471 CKETRR*IQSRNCMRDT-NGNTREASVTKSVA 563
            K   + + + + +RDT NG  RE S  KS A
Sbjct: 131 RKYDDKYLLTLS-VRDTKNGKRREQSSNKSCA 161


>AE013599-1473|AAF58519.3|  396|Drosophila melanogaster CG13158-PA
           protein.
          Length = 396

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 496 CIYRRVSLHKNWLPRPWCYFQPSPWLPQR-CPFSLNVV*RVKIPISMKYD 350
           C+  ++S+H  +L       +PSP   Q+ C F  +++ R ++ I ++ D
Sbjct: 214 CVSSQISMHLGYLANMLASIRPSPETEQQDCDFLASIIKRHQLMIRLQKD 263


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,068,462
Number of Sequences: 53049
Number of extensions: 475201
Number of successful extensions: 1024
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)