Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00835X
         (346 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1228 - 27190983-27191291,27191442-27191675,27191994-271922...    29   1.3  
04_04_0089 - 22724971-22725035,22725403-22725466,22725602-227256...    27   3.0  

>12_02_1228 -
           27190983-27191291,27191442-27191675,27191994-27192269,
           27192420-27192696,27192985-27193283,27193341-27193454,
           27193909-27194118,27194567-27194699,27194941-27195221
          Length = 710

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -3

Query: 104 SVKYNFILLL*LRKFSLWDVLNIFYSIKLNYF 9
           +V +N IL+  LR FSL  +L +F  + LNYF
Sbjct: 84  AVVFNRILVFSLRIFSLAAILCVFGILPLNYF 115


>04_04_0089 -
           22724971-22725035,22725403-22725466,22725602-22725688,
           22726775-22726789,22736269-22736685,22738235-22738473,
           22739673-22740223,22740440-22740540
          Length = 512

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 344 KACKHQHEC*TYYTSFLTIIS 282
           K+C  QHEC  +Y S+L  +S
Sbjct: 467 KSCNKQHECHCHYLSYLPPVS 487


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,594,313
Number of Sequences: 37544
Number of extensions: 97232
Number of successful extensions: 113
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)