Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00835X
         (346 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69646-4|CAD36489.1|  611|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z69646-3|CAA93476.2|  630|Caenorhabditis elegans Hypothetical pr...    28   1.6  
AF497829-1|AAM18107.1|  611|Caenorhabditis elegans putative Na-H...    28   1.6  
AF497828-1|AAM18106.1|  630|Caenorhabditis elegans putative Na-H...    28   1.6  
AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical...    27   4.8  
Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical pr...    26   8.3  

>Z69646-4|CAD36489.1|  611|Caenorhabditis elegans Hypothetical
           protein F57C7.2b protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 306 YQFPHDNFIIFQHRG*RINHLQLCDLTYRHSSLSLVQNQTFNILQLTRTI 157
           + F H  F      G  + +  L     R+  L L+Q+QTF+++   +TI
Sbjct: 61  WAFKHYRFRFIHESGVTLFYGLLIGFVIRYFGLGLLQSQTFDVITKNKTI 110


>Z69646-3|CAA93476.2|  630|Caenorhabditis elegans Hypothetical
           protein F57C7.2a protein.
          Length = 630

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 306 YQFPHDNFIIFQHRG*RINHLQLCDLTYRHSSLSLVQNQTFNILQLTRTI 157
           + F H  F      G  + +  L     R+  L L+Q+QTF+++   +TI
Sbjct: 61  WAFKHYRFRFIHESGVTLFYGLLIGFVIRYFGLGLLQSQTFDVITKNKTI 110


>AF497829-1|AAM18107.1|  611|Caenorhabditis elegans putative Na-H
           exchanger isoform 5b protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 306 YQFPHDNFIIFQHRG*RINHLQLCDLTYRHSSLSLVQNQTFNILQLTRTI 157
           + F H  F      G  + +  L     R+  L L+Q+QTF+++   +TI
Sbjct: 61  WAFKHYRFRFIHESGVTLFYGLLIGFVIRYFGLGLLQSQTFDVITKNKTI 110


>AF497828-1|AAM18106.1|  630|Caenorhabditis elegans putative Na-H
           exchanger isoform 5a protein.
          Length = 630

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 306 YQFPHDNFIIFQHRG*RINHLQLCDLTYRHSSLSLVQNQTFNILQLTRTI 157
           + F H  F      G  + +  L     R+  L L+Q+QTF+++   +TI
Sbjct: 61  WAFKHYRFRFIHESGVTLFYGLLIGFVIRYFGLGLLQSQTFDVITKNKTI 110


>AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.1 protein.
          Length = 502

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 16  FNLME*NIFSTSHKLNLRNYNNSI 87
           F L+E N+ +T HKL LRN    I
Sbjct: 102 FALLEDNVKATQHKLELRNIGKII 125


>Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical
           protein F53H10.2 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 283 HNLPTSRVAY*PLTTM*PYIPTLELEFSTKSD 188
           ++LPT   +Y PL    P +    L+FST +D
Sbjct: 71  NHLPTKNYSYEPLRFSPPNVTPPPLQFSTNTD 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,324,520
Number of Sequences: 27780
Number of extensions: 104408
Number of successful extensions: 167
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)