Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00833
         (755 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    50   6e-05
UniRef50_Q54BL8 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  
UniRef50_A6NWJ5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_A2U307 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 50.0 bits (114), Expect = 6e-05
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = -3

Query: 114 QNFKIKFFLLLRWVDELTAPLVLSGYWSP 28
           + F +  FLLLRWVDELTA LVLSGYWSP
Sbjct: 147 KRFCLSRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q54BL8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 216

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 204 LIKYTLWFNLAFINIEVETKELMKMSNFECVQNEVRFSSVVDRFYDS 344
           L  +TL FNLAF +I ++       S FEC + + ++S  + R Y+S
Sbjct: 8   LFVFTLIFNLAFSHIGIDVSSGTNESGFECFKQK-KYSRAIIRCYES 53


>UniRef50_A6NWJ5 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 576

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +3

Query: 318 SVVDRFYDSRERSACDGKRK*RDCVL*SARREHLGLVT*NYFLYHD 455
           S++ RF+D +E S C G    +DC   S  + +L +V  N +L+HD
Sbjct: 376 SLIARFWDVQEGSVCVGGTDVKDCTADSLLK-NLSMVFQNVYLFHD 420


>UniRef50_A2U307 Cluster: Putative uncharacterized protein; n=1;
           Polaribacter dokdonensis MED152|Rep: Putative
           uncharacterized protein - Polaribacter dokdonensis
           MED152
          Length = 294

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/77 (23%), Positives = 34/77 (44%)
 Frame = +3

Query: 114 DRPSKGNFYIVLVIKKNCNNITIRILK*RNLIKYTLWFNLAFINIEVETKELMKMSNFEC 293
           D   K N+ I  + +KN N ++  I     +  Y  W+     N ++E    + ++ +E 
Sbjct: 148 DSKEKANYLIYQLDRKNSNKLSKEITNNNYINYYNKWYKNKIYNTQLE----INLTKYEN 203

Query: 294 VQNEVRFSSVVDRFYDS 344
           V  E+  + +   FY S
Sbjct: 204 VSKEIHLNYIYQFFYRS 220


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,015,819
Number of Sequences: 1657284
Number of extensions: 14398539
Number of successful extensions: 30095
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30091
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)