Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00832X
         (583 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0595 - 19074594-19075063,19075582-19075851,19075963-19075999     30   1.2  
03_04_0154 - 17749569-17749868                                         30   1.5  
12_01_0238 - 1789114-1790211                                           29   2.7  
11_06_0173 + 20891526-20891957                                         29   2.7  
05_05_0227 - 23449579-23450459,23450574-23450691                       29   2.7  
03_01_0546 - 4089502-4089661,4089959-4090025,4091243-4091684           29   2.7  
08_02_0588 + 19036509-19039235                                         29   3.6  
07_03_1123 - 24152403-24152515,24152761-24152854,24152946-241530...    28   4.7  
04_04_1423 - 33455818-33457076,33457165-33457201                       28   4.7  
10_08_0308 + 16660751-16661450,16661656-16661819,16662615-166628...    28   6.2  
08_02_0538 - 18321101-18321128,18321767-18322587                       28   6.2  
07_03_0851 + 22012836-22014017,22016668-22016734,22016774-220168...    28   6.2  
08_02_0590 + 19044193-19044364,19044464-19045047,19045085-190460...    27   8.2  
06_01_0863 + 6545563-6546714                                           27   8.2  

>10_08_0595 - 19074594-19075063,19075582-19075851,19075963-19075999
          Length = 258

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 299 STNCFFTASDTSGQVRLSFALVGSRAGRR 213
           STN F +A+ TSG+VR S+    SR   R
Sbjct: 219 STNVFVSAATTSGEVRTSYEFAASRRRSR 247


>03_04_0154 - 17749569-17749868
          Length = 99

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 21/46 (45%), Positives = 22/46 (47%)
 Frame = +3

Query: 273 GGCEETVRAQRGEDPGQVMSQGRAGRVSRWRQNISGGSGVDDAGPV 410
           GG    V    G   GQV + G AG V RWRQ   GG G   AG V
Sbjct: 18  GGGNSAVEVGSG---GQVEAGGSAGAV-RWRQEAEGGGGA-GAGEV 58


>12_01_0238 - 1789114-1790211
          Length = 365

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = +3

Query: 147 WKGGRGPSGRAGRL 188
           WKGGRG +G AGRL
Sbjct: 85  WKGGRGGAGTAGRL 98


>11_06_0173 + 20891526-20891957
          Length = 143

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -3

Query: 572 ELVVDEAGGLHAAPAAVVGGGREYVQPRRHCRSQCSTVRPTDSCPSSRLHVR 417
           ++VV   GG +    + VGG  +      HCR +CS   P         H+R
Sbjct: 55  KVVVGSHGGGNLDSGSYVGGNLDSAVQAHHCRGECSRPYPLAHLDRHVQHLR 106


>05_05_0227 - 23449579-23450459,23450574-23450691
          Length = 332

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 20/66 (30%), Positives = 26/66 (39%)
 Frame = +2

Query: 2   SYRCVXDGGGGLRSVASEQRCETDCQPGWKYIPAPAECCGRCKPVACVVEGRERPVGESW 181
           S  C  DGGGG  S  + +     C+P      AP   CG+C  +        RP    W
Sbjct: 227 SSSCRGDGGGGRPSAPARREGTDPCRP--VLGGAPFVICGKCSEL-LRTPPPPRPRRRRW 283

Query: 182 TSADFC 199
           T+   C
Sbjct: 284 TTRIRC 289


>03_01_0546 - 4089502-4089661,4089959-4090025,4091243-4091684
          Length = 222

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 294 RAQRGEDPGQVMSQGRAGRVSRWRQNISGGSGVDDAGPVHQPD 422
           R++R    G  M++  A   SRWR +   GSG DD G    PD
Sbjct: 98  RSRRSGLAGLKMARA-ASTASRWRASAEQGSGEDDYGGSVVPD 139


>08_02_0588 + 19036509-19039235
          Length = 908

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +3

Query: 291 VRAQRGEDPGQVMSQGRAGRVSRWRQNISGGSGVDDAGPVHQP 419
           V A  G   G    +GR G    W  +  GG G + AG V  P
Sbjct: 83  VAAAGGRGEGGDRMRGRGGEEGTWTAHGGGGRGAERAGAVVAP 125


>07_03_1123 -
           24152403-24152515,24152761-24152854,24152946-24153087,
           24153614-24153754,24154186-24154385
          Length = 229

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 352 CR-DGDKIYQEVQVWTTPDPCTNRTCRREDGQLSVGR 459
           CR +G +  + V+ W +   C    CRR D  LSV R
Sbjct: 94  CRSEGAEAVRYVKAWKSMSRCGAAACRRGDTALSVSR 130


>04_04_1423 - 33455818-33457076,33457165-33457201
          Length = 431

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 545 LHAAPAAVVGGGREYVQPRRHCRSQ--CSTVRPTDSCPSSRLHVRLVHG 405
           L  A AA  GGGRE  +  R C     C   RP D  PS    VR++ G
Sbjct: 342 LARATAAAAGGGREREKAERVCMVALWCVQYRPEDR-PSMGNVVRMLEG 389


>10_08_0308 +
           16660751-16661450,16661656-16661819,16662615-16662800,
           16663297-16663533
          Length = 428

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 186 DVQLSPTGLSRPSTTQATGLQRPQHSAGAG 97
           DV LSP  L  P+   A+ L  P H A AG
Sbjct: 173 DVLLSPPYLVDPNRASASSLSTPLHLAAAG 202


>08_02_0538 - 18321101-18321128,18321767-18322587
          Length = 282

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 23  GGGGLRSVASEQRCETDCQPGWKYIPAPAECCGRCKPVACVVE 151
           GGGG  S+ +    + DC+    Y+    +  G   PVA +VE
Sbjct: 140 GGGGSSSIDAAVADQIDCRVKALYVDPDHQLVGMDGPVASIVE 182


>07_03_0851 +
           22012836-22014017,22016668-22016734,22016774-22016868,
           22017304-22017717
          Length = 585

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -1

Query: 391 TPEPPDIFCRHLDTRPAR-PWDITCPGSSPL*ARTVSSQPPTLQDKSV 251
           TPE PD+ C  LD +  +   D+T PG++ L     +   PTL   SV
Sbjct: 374 TPEEPDLECFSLDVKTLQLEPDLTYPGTTILDKPFRARLYPTLDGVSV 421


>08_02_0590 +
           19044193-19044364,19044464-19045047,19045085-19046059,
           19046219-19046605
          Length = 705

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 333 QGRAGRVSRWRQNISGGSGVDDAGPVHQP 419
           +GR G    W+ +  GG G + AG V  P
Sbjct: 2   RGRGGEEGTWKSHGGGGRGAERAGAVVAP 30


>06_01_0863 + 6545563-6546714
          Length = 383

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -3

Query: 539 AAPAAVVGGGREYVQPRRHCRSQCSTVR--PTDSCPSS 432
           AA AAV  GGR+   P   C   C  VR  P D+C  S
Sbjct: 316 AAVAAVGKGGRQLAPPSEPC-GGCGGVRFVPCDACSGS 352


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,477,262
Number of Sequences: 37544
Number of extensions: 319428
Number of successful extensions: 1301
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)