Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00831X
(338 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4D7.06c |||siroheme synthase |Schizosaccharomyces pombe|chr ... 27 1.0
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 26 1.8
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 2.4
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 3.2
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 24 5.5
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 24 5.5
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 24 7.3
SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr 3|... 24 7.3
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 24 7.3
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 24 7.3
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 24 7.3
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 23 9.6
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 23 9.6
SPBC1685.11 |rlp1||RecA family ATPase Rlp1|Schizosaccharomyces p... 23 9.6
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 23 9.6
SPBC23E6.05 |arx1||ribosomal export complex Arx1 |Schizosaccharo... 23 9.6
>SPAC4D7.06c |||siroheme synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 264
Score = 26.6 bits (56), Expect = 1.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 189 IKADCASLPFIPTRLGSVKEVSHRI*EPRVSWSERG 296
+ AD A + + + G KEV+ RI E +V W +RG
Sbjct: 42 LNAD-AHVIVVSPKAGLCKEVAWRIQEKQVEWRDRG 76
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.8 bits (54), Expect = 1.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 166 QTKTFPLNISN*VQIQTPPHSVRDS 92
Q +FPL N Q + P HS+RD+
Sbjct: 501 QPHSFPLRKQNVAQSEFPKHSLRDN 525
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 2.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -1
Query: 284 PAHPGLSYPVADFFDAPQSRWNER*TGAVGFYPYSH*NYTNKNLS 150
P+ P + +++ FD+ + +N TG Y + +YT N S
Sbjct: 314 PSTPSSAVTLSNGFDSQSNAYNNSGTGPPMLYKFPQRSYTAPNTS 358
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.0 bits (52), Expect = 3.2
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -3
Query: 201 SRLLSIQSLKLYKQKPFRLTFPTESKYRHHR--TAYEIVLIRNTNVARLSNYQNARIVVF 28
S + +Q+ K KP L TES+ + +R E++ ++ + ARL + + ++
Sbjct: 1125 SAIAELQAKSSIKSKPLTLKTATESEIKGYRDQIQLEVLNLKPDSEARLQAIERSELLQK 1184
Query: 27 RR 22
+R
Sbjct: 1185 KR 1186
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 24.2 bits (50), Expect = 5.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 132 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTVVY 10
E+ YR R YE +L ++ L YQ +I +TVVY
Sbjct: 260 ENAYRQ-RMLYESLLEEVPILSSLDKYQRQKIADALQTVVY 299
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 24.2 bits (50), Expect = 5.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 80 FRIKTISYAVRWCLYLDSV 136
F I +++ A RWC +LD++
Sbjct: 351 FYIPSLNPAPRWCSFLDNI 369
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 23.8 bits (49), Expect = 7.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 56 LDKRATFVFRIKTISYAVRWCLYLDSVGNVK 148
L+ FVF + T+ Y C YLD +K
Sbjct: 2492 LENITGFVFTVPTMEYRNEVCSYLDLAMKLK 2522
>SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 531
Score = 23.8 bits (49), Expect = 7.3
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 126 KYRHHRTAYEIVLIRNTNVARLSN--YQNARIVVFRRTVVYG 7
K+R+ T EI ++R T R+S+ Y +++ F V+YG
Sbjct: 69 KWRNKITKSEIAMVRYTVCGRISSIRYSGSKLAFF--DVLYG 108
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 23.8 bits (49), Expect = 7.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 309 TPSRTLARTSSPGALISGG*LL*RSPIS 226
+P+R+ ART SP L S L +SP+S
Sbjct: 215 SPTRSPARTPSPIRLYSSDALRPQSPLS 242
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 23.8 bits (49), Expect = 7.3
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 314 VAPPRGPSLGPAHPGLSYPVADFFDAPQSRWN 219
VA P G L PA GLS +F D S+ N
Sbjct: 66 VACPSGSLLRPASDGLSTGEQEFVDKRVSKVN 97
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 23.8 bits (49), Expect = 7.3
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = -3
Query: 96 IVLIRNTNVARLSNYQNARIVVFRRTVVYG 7
I +++ ++A + NY++ + RR++ YG
Sbjct: 216 IRILKRNSIATIGNYRSPSALEKRRSISYG 245
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +2
Query: 56 LDKRATFVFRIKTISYAVRWCLYLDSVGNVKRKGFCLYS 172
L KR F +T++Y C++ + +G CL++
Sbjct: 242 LQKREDLYFSSRTLAYVFGGCMHSLETIEGEEEGECLFN 280
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 23.4 bits (48), Expect = 9.6
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -2
Query: 325 TQRRWHPLADPRSDQLTRGSHIRWLTSLTLPNLVGMNGRLAQSAFIH 185
+ + W+ L+D R SH + LTL + G G+ A + ++
Sbjct: 327 SSKHWYKLSDLPFTPSPRSSHTLSCSGLTLVLIGGKQGKGASDSNVY 373
>SPBC1685.11 |rlp1||RecA family ATPase Rlp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 23.4 bits (48), Expect = 9.6
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 78 YFVLRLSRTLCGGVCIWTQLE---MLSGKVFVCIVLVTVWIKADCASLPFIPTRLGSVKE 248
Y+ LRL R G ++ L+ S K+F C V+ T W+ + LP R S +
Sbjct: 264 YWQLRLER---GYTQVYADLQNRLCTSSKLFGCPVVCTNWLLNNKQHLPIQCKRFRSERR 320
Query: 249 VSHR 260
+ R
Sbjct: 321 ANAR 324
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 176 SDCMDKSRLRQSTVHSNEIGERQRSQPPDMRAPGE 280
SD + K +L + + +++ +RS+ D+R P E
Sbjct: 332 SDNLPKPQLLKRPIDDSDVRISKRSRGRDLRTPSE 366
>SPBC23E6.05 |arx1||ribosomal export complex Arx1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 417
Score = 23.4 bits (48), Expect = 9.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 326 HTAAVAPPRGPSLGP 282
HT V PP P +GP
Sbjct: 128 HTIVVTPPPQPGMGP 142
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,559,030
Number of Sequences: 5004
Number of extensions: 30672
Number of successful extensions: 91
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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