Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00831X
         (338 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF308819-1|AAL55819.1|  450|Homo sapiens nuclear receptor-intera...    29   3.7  
AF209198-1|AAF85941.1|  438|Homo sapiens zinc finger protein 277...    29   3.7  
AC004112-1|AAS07407.1|  419|Homo sapiens unknown protein.              29   3.7  
AL929472-10|CAH70085.1|  156|Homo sapiens chromosome 1 open read...    28   8.5  
AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein.     28   8.5  
AK127381-1|BAC86950.1|  156|Homo sapiens protein ( Homo sapiens ...    28   8.5  

>AF308819-1|AAL55819.1|  450|Homo sapiens nuclear
           receptor-interacting factor protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 132 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTVVYGCR 1
           E  Y H   A+E  L++  +   L+ YQ  ++V F R  V+ CR
Sbjct: 315 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 358


>AF209198-1|AAF85941.1|  438|Homo sapiens zinc finger protein 277
           protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 132 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTVVYGCR 1
           E  Y H   A+E  L++  +   L+ YQ  ++V F R  V+ CR
Sbjct: 303 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 346


>AC004112-1|AAS07407.1|  419|Homo sapiens unknown protein.
          Length = 419

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 132 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTVVYGCR 1
           E  Y H   A+E  L++  +   L+ YQ  ++V F R  V+ CR
Sbjct: 284 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 327


>AL929472-10|CAH70085.1|  156|Homo sapiens chromosome 1 open reading
           frame 122 protein.
          Length = 156

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +1

Query: 226 RDWGA-SKKSATGYESPG*AGPSEGPRGGATAA 321
           R+ GA +++ AT   +PG A P+   RGGA AA
Sbjct: 18  REGGAGARREATPTAAPGGARPAAAGRGGAAAA 50


>AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein.
          Length = 1651

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 323 TAAVAPPRGPSLGPAHPGLSYPV 255
           +A+V PPR P   P  P  +YP+
Sbjct: 560 SASVTPPRTPDSAPPSPAEAYPI 582


>AK127381-1|BAC86950.1|  156|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45459 fis, clone BRSTN2010416. ).
          Length = 156

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +1

Query: 226 RDWGA-SKKSATGYESPG*AGPSEGPRGGATAA 321
           R+ GA +++ AT   +PG A P+   RGGA AA
Sbjct: 18  REGGAGARREATPTAAPGGARPAAAGRGGAAAA 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,631,455
Number of Sequences: 237096
Number of extensions: 1267176
Number of successful extensions: 3948
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3948
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)