Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00831X
(338 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068708-11|AAC17757.1| 136|Caenorhabditis elegans Hypothetical... 31 0.28
U80445-7|AAB37798.1| 368|Caenorhabditis elegans Hypothetical pr... 29 0.85
U80437-6|AAB37621.1| 368|Caenorhabditis elegans Hypothetical pr... 29 0.85
Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical pr... 27 3.4
AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine rece... 27 3.4
AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine rece... 27 3.4
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 27 4.5
U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical p... 27 4.5
AL022272-3|CAA18353.1| 322|Caenorhabditis elegans Hypothetical ... 27 4.5
AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A prote... 27 4.5
Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 26 7.9
AC025715-5|AAP13755.1| 281|Caenorhabditis elegans Hypothetical ... 26 7.9
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 26 7.9
>AF068708-11|AAC17757.1| 136|Caenorhabditis elegans Hypothetical
protein C18G1.1 protein.
Length = 136
Score = 30.7 bits (66), Expect = 0.28
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -3
Query: 192 LSIQSLKLYKQKPFRLTFPTESKYRHHRTAYEIVL 88
+S+ LK Y +KP R TE++ +H+RT + I+L
Sbjct: 45 ISLFPLKDYSRKPGRGPQRTEAEMKHYRTVFYIIL 79
>U80445-7|AAB37798.1| 368|Caenorhabditis elegans Hypothetical
protein C50F2.5 protein.
Length = 368
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 129 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 28
+KY T E+V+ +N++ SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222
>U80437-6|AAB37621.1| 368|Caenorhabditis elegans Hypothetical
protein C43E11.5 protein.
Length = 368
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 129 SKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVF 28
+KY T E+V+ +N++ SNY++ R++VF
Sbjct: 189 TKYELELTDSEVVIDKNSDDPNASNYKSHRLIVF 222
>Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5b protein.
Length = 212
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 227 EIGERQRSQPPDMRAPGELVRARVREGVPP 316
E+ +R+RSQ P R P VR +R PP
Sbjct: 48 ELLDRRRSQSPPPREPSPDVRRAIRRTPPP 77
>Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5a protein.
Length = 212
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 227 EIGERQRSQPPDMRAPGELVRARVREGVPP 316
E+ +R+RSQ P R P VR +R PP
Sbjct: 48 ELLDRRRSQSPPPREPSPDVRRAIRRTPPP 77
>Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical
protein C02D4.2f protein.
Length = 421
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 159 FVCIVLVTVWIKADCASLP 215
FVCIV+V VWI + S+P
Sbjct: 163 FVCIVIVIVWILSMLISVP 181
>Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical
protein C02D4.2e protein.
Length = 455
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 159 FVCIVLVTVWIKADCASLP 215
FVCIV+V VWI + S+P
Sbjct: 174 FVCIVIVIVWILSMLISVP 192
>Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical
protein C02D4.2b protein.
Length = 429
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 159 FVCIVLVTVWIKADCASLP 215
FVCIV+V VWI + S+P
Sbjct: 171 FVCIVIVIVWILSMLISVP 189
>Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical
protein C02D4.2a protein.
Length = 432
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 159 FVCIVLVTVWIKADCASLP 215
FVCIV+V VWI + S+P
Sbjct: 174 FVCIVIVIVWILSMLISVP 192
>AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine
receptor short isoformSER-2a protein.
Length = 421
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 159 FVCIVLVTVWIKADCASLP 215
FVCIV+V VWI + S+P
Sbjct: 163 FVCIVIVIVWILSMLISVP 181
>AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine
receptor long isoformSER-2 protein.
Length = 444
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 159 FVCIVLVTVWIKADCASLP 215
FVCIV+V VWI + S+P
Sbjct: 163 FVCIVIVIVWILSMLISVP 181
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 176 SDCMDKSRLRQSTVHSNEIGERQRSQPPDMRAPGELVRARVREGVPPP 319
S SR RQ + +E R R +PP RAP E + R G PP
Sbjct: 286 SSTTTSSRRRQVSPDRSE-QRRHRDEPPPRRAPQE--QPSRRRGASPP 330
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 176 SDCMDKSRLRQSTVHSNEIGERQRSQPPDMRAPGELVRARVREGVPPP 319
S SR RQ + +E R R +PP RAP E + R G PP
Sbjct: 394 SSTTTSSRRRQVSPDRSE-QRRHRDEPPPRRAPQE--QPSRRRGASPP 438
>U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical
protein R151.10 protein.
Length = 233
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 257 PDMRAPGELVRARVREGVPPPLCAGRC 337
P M +LVR + GVP LC G C
Sbjct: 89 PAMPGAEKLVRHLLHTGVPVALCTGSC 115
>AL022272-3|CAA18353.1| 322|Caenorhabditis elegans Hypothetical
protein H12C20.5 protein.
Length = 322
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 155 GFCLYSFSDCMD--KSRLRQSTVHSNEIGERQRSQP 256
GF + F++ + KS+ + +TVH +GER R P
Sbjct: 277 GFIMVLFNEKVSFFKSKSKNTTVHPTIVGERTRHGP 312
>AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A protein
protein.
Length = 233
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 257 PDMRAPGELVRARVREGVPPPLCAGRC 337
P M +LVR + GVP LC G C
Sbjct: 89 PAMPGAEKLVRHLLHTGVPVALCTGSC 115
>Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical
protein C13G3.3b protein.
Length = 561
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 293 SLGPAHPGLSYPVADFFDAPQSRWNER*TGAVGFYPYSH 177
SL HP L+Y V F + S +G + F+P H
Sbjct: 284 SLSVYHPQLAYCVVQFIEKDSSLTEPVISGMLRFWPKQH 322
>Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical
protein C13G3.3a protein.
Length = 557
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 293 SLGPAHPGLSYPVADFFDAPQSRWNER*TGAVGFYPYSH 177
SL HP L+Y V F + S +G + F+P H
Sbjct: 280 SLSVYHPQLAYCVVQFIEKDSSLTEPVISGMLRFWPKQH 318
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 281 AHPGLSYPVADFFDAP 234
AHPGL+ P+A F +P
Sbjct: 1203 AHPGLTTPMASIFQSP 1218
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 281 AHPGLSYPVADFFDAP 234
AHPGL+ P+A F +P
Sbjct: 1203 AHPGLTTPMASIFQSP 1218
>AC025715-5|AAP13755.1| 281|Caenorhabditis elegans Hypothetical
protein Y38F2AR.3 protein.
Length = 281
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 193 KPTAPVYRSFQRDWGASKKSATGYES 270
KP YR F+RD+ KSA+ ++S
Sbjct: 222 KPVNDAYRLFKRDYEKELKSASEWDS 247
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 281 AHPGLSYPVADFFDAP 234
AHPGL+ P+A F +P
Sbjct: 1203 AHPGLTTPMASIFQSP 1218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,880,599
Number of Sequences: 27780
Number of extensions: 181939
Number of successful extensions: 577
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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