Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00828
         (618 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0208 + 26385379-26385485,26385819-26385965,26385994-263860...    95   4e-20
06_02_0023 + 10702040-10702364,10702530-10702747,10703643-107041...    29   3.0  
11_03_0120 - 10255303-10255518,10256490-10256582,10256774-102568...    27   9.0  

>05_06_0208 +
           26385379-26385485,26385819-26385965,26385994-26386035,
           26386231-26386275,26386375-26386544,26386779-26386864,
           26386953-26387060,26387680-26387809,26388144-26388231,
           26388511-26388555,26388639-26388808,26388931-26389016,
           26389115-26389222,26389332-26389381,26389521-26389725
          Length = 528

 Score = 95.1 bits (226), Expect = 4e-20
 Identities = 41/83 (49%), Positives = 59/83 (71%)
 Frame = +1

Query: 1   VLYPCDENLIDYMKWRQADVHINNLYNTTFWTLILKGQLTPVQAEKRLSGTVSADKNEIL 180
           V YP  + + DY+ WRQ D HINN YNT FW+L+  G+ T  +A++ L GT S DKNE+L
Sbjct: 152 VCYPNLKTIRDYLAWRQVDCHINNQYNTCFWSLVKSGK-TEKEAQQALKGTFSKDKNELL 210

Query: 181 FQEFNMNYNNEPEIFKRGTILLR 249
            Q+F +NY++EP IF++G+ + R
Sbjct: 211 SQQFQINYDDEPAIFRKGSCVYR 233



 Score = 87.8 bits (208), Expect = 6e-18
 Identities = 38/82 (46%), Positives = 57/82 (69%)
 Frame = +1

Query: 7   YPCDENLIDYMKWRQADVHINNLYNTTFWTLILKGQLTPVQAEKRLSGTVSADKNEILFQ 186
           YP  + L DY+  RQA+ H  N Y+T FW L+  G+ +  +A + L GT+S DKNE+LFQ
Sbjct: 363 YPKQKILCDYLSSRQAECHTTNQYSTCFWMLVKSGK-SENEAREILKGTLSKDKNELLFQ 421

Query: 187 EFNMNYNNEPEIFKRGTILLRK 252
           +F++NYNNEP +F++G+   R+
Sbjct: 422 QFHLNYNNEPAVFRKGSCTYRQ 443


>06_02_0023 +
           10702040-10702364,10702530-10702747,10703643-10704190,
           10704272-10704523,10704611-10704721,10704812-10704893,
           10704969-10705061,10705146-10705340
          Length = 607

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +1

Query: 43  WRQADVHINNLYNTTFWTLILKGQLTPVQAEKRLSGTVSADKN 171
           W+   +HI NL     W   +    TP   EKR   +  A KN
Sbjct: 95  WKNVSIHIKNLMWEVEWDKFVAKMTTPKALEKRKKMSDLAKKN 137


>11_03_0120 -
           10255303-10255518,10256490-10256582,10256774-10256872,
           10258145-10258264,10258345-10258467,10259933-10260046,
           10261173-10261361,10263100-10263266,10263829-10263913,
           10264176-10264370,10266251-10266436,10266575-10266614,
           10267899-10267966
          Length = 564

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +3

Query: 261 HNKVN--KSIIVDVHDDMLKDKFWKENIYILSVKKSKQNLMYIGPTTEIIEDQLSKYESH 434
           +NK+N   + I    DD++    W +NI + S+ K  + L  + P  ++ +  L+    H
Sbjct: 233 YNKINWNNARISCCKDDIIYPPSWFQNIAMASLHKFMEPLFNMWPMNKLRKRALTNLMDH 292

Query: 435 LEA*HNNDIYL 467
           +     N  Y+
Sbjct: 293 IHYEDENSNYV 303


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,835,447
Number of Sequences: 37544
Number of extensions: 226888
Number of successful extensions: 446
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)