Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00828
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93379-2|CAB07592.1|  170|Caenorhabditis elegans Hypothetical pr...    29   2.7  
M77697-6|AAA27901.2|  603|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AC098856-6|AAR12981.1|   93|Caenorhabditis elegans Hypothetical ...    29   3.5  
AC084197-6|AAO38572.1|  328|Caenorhabditis elegans Serpentine re...    28   6.1  
AC090999-26|ABA00172.1|  398|Caenorhabditis elegans Hypothetical...    27   8.1  

>Z93379-2|CAB07592.1|  170|Caenorhabditis elegans Hypothetical
           protein F21H7.3 protein.
          Length = 170

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +3

Query: 255 ILHNKVNKSIIVDVHDDMLKDKFWKENIYILSVKKSKQNLMYI 383
           IL NKV K ++ DV  D  K K W EN + +S+K + + +M I
Sbjct: 59  ILFNKVKK-LMEDVPQDGRK-KNWFENFWWISIKYALEGVMLI 99


>M77697-6|AAA27901.2|  603|Caenorhabditis elegans Hypothetical
           protein B0303.9 protein.
          Length = 603

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +1

Query: 64  INNLYNTTFWTLILKGQLTPVQAEKRLSGTVSADKNEILFQEFNMNYNNEPEIFKRGTI 240
           +N  Y ++    +LK Q   +  EK   G +  +  +++FQ+   N++  PE F    +
Sbjct: 452 VNQSYGSSALNKVLKMQKMGLIREKGGGGKMQCEYAQMMFQQMKKNHDMLPEEFSEAKL 510


>AC098856-6|AAR12981.1|   93|Caenorhabditis elegans Hypothetical
          protein Y37F4.7 protein.
          Length = 93

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 7  YPCDENLIDYMKWRQADVHIN 69
          YP   NL  Y +W  ADVH+N
Sbjct: 7  YPHQWNLRQYRRWIPADVHVN 27


>AC084197-6|AAO38572.1|  328|Caenorhabditis elegans Serpentine
           receptor, class v protein25 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +1

Query: 64  INNLYNTTFWTLILKGQLTPVQAEKRLSGTVSADKNEILFQEFNMNYNN 210
           I+  YNTTF+TL+L+  +  + A       ++A    I+ +EF  NY +
Sbjct: 41  ISKTYNTTFYTLLLQHCIADLLAMMMYFVIIAARAIPII-REFYFNYQD 88


>AC090999-26|ABA00172.1|  398|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.19 protein.
          Length = 398

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 427 KVI*KLDITMT-SIYFEEQFNTILNYSVNYIKLLSYFRCKI 546
           + I KLD+T T +IYFE   +   + S++ I  +  F C I
Sbjct: 154 ETIKKLDLTSTKTIYFERILDINFSESIDIINYIQGFLCSI 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,457,503
Number of Sequences: 27780
Number of extensions: 245537
Number of successful extensions: 534
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)