Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00828
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.0  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    24   1.4  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   1.4  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   1.4  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   1.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.2  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.6  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +3

Query: 333 NIYILSVKKSKQNLMYIGPTTEI--IEDQLSKYE 428
           N+ I SVK S+ ++ +  P TEI    D + +YE
Sbjct: 424 NVRITSVKSSELSISWDAPITEIGGDSDLVERYE 457


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 319 LSFNISS*TSTMIDLFTLLCNMTFAIEL 236
           LS +++S  S++I  FT+LC +T A+ L
Sbjct: 20  LSLSLTSLASSLI--FTILCILTLALTL 45


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 319 LSFNISS*TSTMIDLFTLLCNMTFAIEL 236
           LS +++S  S++I  FT+LC +T A+ L
Sbjct: 20  LSLSLTSLASSLI--FTILCILTLALTL 45


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 319 LSFNISS*TSTMIDLFTLLCNMTFAIEL 236
           LS +++S  S++I  FT+LC +T A+ L
Sbjct: 20  LSLSLTSLASSLI--FTILCILTLALTL 45


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 319 LSFNISS*TSTMIDLFTLLCNMTFAIEL 236
           LS +++S  S++I  FT+LC +T A+ L
Sbjct: 20  LSLSLTSLASSLI--FTILCILTLALTL 45


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +2

Query: 320 ILERKHIYIICKKI*TKFNVYRSYNRNH 403
           I E+ +  ++C+K   + N+Y+S+ R+H
Sbjct: 57  IEEKTYQCLLCQKAFDQKNLYQSHLRSH 84


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 255 ILHNKVNKSIIVDVHDDMLKDKFWKENIYILSVKKSKQNLMYIGP 389
           +LH+ +NK II   +D + KD +   +I +L  +K  +    +GP
Sbjct: 232 VLHS-INKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGP 275


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 508 NYIKLLSYFRCKILNFVFDVKHQ 576
           N   ++ YF  + LNF F  K++
Sbjct: 76  NLANVIRYFPTQALNFAFKDKYK 98


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 508 NYIKLLSYFRCKILNFVFDVKHQ 576
           N   ++ YF  + LNF F  K++
Sbjct: 76  NLANVIRYFPTQALNFAFKDKYK 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,924
Number of Sequences: 438
Number of extensions: 3064
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)