Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00826X
         (558 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034152-1|AAH34152.1|  124|Homo sapiens Similar to hypothetical...    33   0.90 
BC004117-1|AAH04117.1|  294|Homo sapiens DHDDS protein protein.        33   0.90 
BC003643-1|AAH03643.1|  333|Homo sapiens dehydrodolichyl diphosp...    33   0.90 
AL513365-8|CAI21496.1|  216|Homo sapiens dehydrodolichyl diphosp...    33   0.90 
AL513365-7|CAI21495.1|  334|Homo sapiens dehydrodolichyl diphosp...    33   0.90 
AL513365-4|CAI21492.1|  240|Homo sapiens dehydrodolichyl diphosp...    33   0.90 
AL513365-3|CAI21491.1|  161|Homo sapiens dehydrodolichyl diphosp...    33   0.90 
AK023164-1|BAB14439.1|  334|Homo sapiens protein ( Homo sapiens ...    33   0.90 
AB090852-1|BAC57588.1|  333|Homo sapiens dehydrodolichyl diphosp...    33   0.90 

>BC034152-1|AAH34152.1|  124|Homo sapiens Similar to hypothetical
           protein FLJ13102 protein.
          Length = 124

 Score = 32.7 bits (71), Expect = 0.90
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 512 LFTDVLWPEFTIWNLF 465
           +F  VLWPE+T WNLF
Sbjct: 17  VFQPVLWPEYTFWNLF 32



 Score = 31.5 bits (68), Expect = 2.1
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRNAPPI-KAEDTNETAHEKKEFL 377
           LSDF+LWQ S++ L  +        F     AI+ FQ N   + KA D    A E+K   
Sbjct: 3   LSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARDM--YAEERKR-- 58

Query: 376 KYLEQRRAQE 347
           + LE+ +A E
Sbjct: 59  QQLERDQATE 68


>BC004117-1|AAH04117.1|  294|Homo sapiens DHDDS protein protein.
          Length = 294

 Score = 32.7 bits (71), Expect = 0.90
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 512 LFTDVLWPEFTIWNLF 465
           +F  VLWPE+T WNLF
Sbjct: 187 VFQPVLWPEYTFWNLF 202



 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRNAPPI-KAED 413
           LSDF+LWQ S++ L  +        F     AI+ FQ N   + KA D
Sbjct: 173 LSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARD 220


>BC003643-1|AAH03643.1|  333|Homo sapiens dehydrodolichyl
           diphosphate synthase protein.
          Length = 333

 Score = 32.7 bits (71), Expect = 0.90
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 512 LFTDVLWPEFTIWNLF 465
           +F  VLWPE+T WNLF
Sbjct: 226 VFQPVLWPEYTFWNLF 241



 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRNAPPI-KAED 413
           LSDF+LWQ S++ L  +        F     AI+ FQ N   + KA D
Sbjct: 212 LSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSMLQKARD 259


>AL513365-8|CAI21496.1|  216|Homo sapiens dehydrodolichyl
           diphosphate synthase protein.
          Length = 216

 Score = 32.7 bits (71), Expect = 0.90
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 512 LFTDVLWPEFTIWNLF 465
           +F  VLWPE+T WNLF
Sbjct: 187 VFQPVLWPEYTFWNLF 202



 Score = 29.5 bits (63), Expect = 8.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRN 437
           LSDF+LWQ S++ L  +        F     AI+ FQ N
Sbjct: 173 LSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMN 211


>AL513365-7|CAI21495.1|  334|Homo sapiens dehydrodolichyl
           diphosphate synthase protein.
          Length = 334

 Score = 32.7 bits (71), Expect = 0.90
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRNAPPIKAEDTNETAHEKK 386
           LSDF+LWQ S++ L  +        F     AI+ FQ N   ++ +  +  A E+K
Sbjct: 212 LSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQQKARDMYAEERK 267


>AL513365-4|CAI21492.1|  240|Homo sapiens dehydrodolichyl
           diphosphate synthase protein.
          Length = 240

 Score = 32.7 bits (71), Expect = 0.90
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 512 LFTDVLWPEFTIWNLF 465
           +F  VLWPE+T WNLF
Sbjct: 133 VFQPVLWPEYTFWNLF 148



 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRNAPPI-KAED 413
           LSDF+LWQ S++ L  +        F     AI+ FQ N   + KA D
Sbjct: 119 LSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARD 166


>AL513365-3|CAI21491.1|  161|Homo sapiens dehydrodolichyl
           diphosphate synthase protein.
          Length = 161

 Score = 32.7 bits (71), Expect = 0.90
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 512 LFTDVLWPEFTIWNLF 465
           +F  VLWPE+T WNLF
Sbjct: 102 VFQPVLWPEYTFWNLF 117



 Score = 30.7 bits (66), Expect = 3.6
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRNAPPIKAEDTNETAHEKKEF 380
           LSDF+LWQ S++ L  +        F     AI+ FQ N   ++   +  T   KK F
Sbjct: 88  LSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQHPGSLLTKAWKKPF 145


>AK023164-1|BAB14439.1|  334|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13102 fis, clone NT2RP3002303, weakly similar to
           PROBABLE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE (EC
           2.5.1.31). ).
          Length = 334

 Score = 32.7 bits (71), Expect = 0.90
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRNAPPIKAEDTNETAHEKK 386
           LSDF+LWQ S++ L  +        F     AI+ FQ N   ++ +  +  A E+K
Sbjct: 212 LSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSMLQQKARDMYAEERK 267


>AB090852-1|BAC57588.1|  333|Homo sapiens dehydrodolichyl
           diphosphate synthase protein.
          Length = 333

 Score = 32.7 bits (71), Expect = 0.90
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 512 LFTDVLWPEFTIWNLF 465
           +F  VLWPE+T WNLF
Sbjct: 226 VFQPVLWPEYTFWNLF 241



 Score = 29.9 bits (64), Expect = 6.3
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRNAPPI-KAED 413
           LSDF+LWQ S++ L  +        F     AI+ FQ N   + KA D
Sbjct: 212 LSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARD 259


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,005,776
Number of Sequences: 237096
Number of extensions: 1216524
Number of successful extensions: 2141
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2139
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)