Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00826X
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069247-1|AAL39392.1|  300|Drosophila melanogaster GM02310p pro...    38   0.012
AE014298-1088|AAF46296.2|  300|Drosophila melanogaster CG10778-P...    38   0.012
AY051557-1|AAK92981.1|  815|Drosophila melanogaster GH20665p pro...    29   5.6  
AE014297-886|AAF54342.1| 1342|Drosophila melanogaster CG9746-PA ...    29   5.6  

>AY069247-1|AAL39392.1|  300|Drosophila melanogaster GM02310p
           protein.
          Length = 300

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRN 437
           LSDFM+WQ+S +VLY          F  +LA+I+ +QR+
Sbjct: 212 LSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQRD 250


>AE014298-1088|AAF46296.2|  300|Drosophila melanogaster CG10778-PA
           protein.
          Length = 300

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = -3

Query: 553 LSDFMLWQISNTVLYSRMYCGQNSRFGIYLAAIIHFQRN 437
           LSDFM+WQ+S +VLY          F  +LA+I+ +QR+
Sbjct: 212 LSDFMMWQLSTSVLYFSNVLWPQITFWHFLASILAYQRD 250


>AY051557-1|AAK92981.1|  815|Drosophila melanogaster GH20665p
           protein.
          Length = 815

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 162 YTTIYGSKVNLFRKIHHTIIKMQSSINHYVITPI 263
           Y T+YG  V    ++ H+  ++Q+ + H VIT I
Sbjct: 557 YATLYGGIVAWDTRMQHSAWRLQNELRHGVITTI 590


>AE014297-886|AAF54342.1| 1342|Drosophila melanogaster CG9746-PA
            protein.
          Length = 1342

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 162  YTTIYGSKVNLFRKIHHTIIKMQSSINHYVITPI 263
            Y T+YG  V    ++ H+  ++Q+ + H VIT I
Sbjct: 1084 YATLYGGIVAWDTRMQHSAWRLQNELRHGVITTI 1117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,218,397
Number of Sequences: 53049
Number of extensions: 369505
Number of successful extensions: 724
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)