Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00826X
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical ...    31   0.43 
U42831-1|AAA83513.2|  614|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z82280-5|CAB05266.1|  294|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81517-7|CAE11306.1|  329|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z48582-3|CAA88464.1|  401|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical
           protein Y54G9A.10 protein.
          Length = 365

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +1

Query: 256 RLLYSR*IVEAFRLIYFIVLIRNIN*YILLVLELFFALNISKIPSFRAPFHWCLPLL--- 426
           R+ Y   I++ F L+ F  L+  I+   L ++ LF+++  S I      FH  L +L   
Sbjct: 11  RICYPTYIIQNFELLKFPWLLLEISELFLFIITLFYSIKCSYIVLKVRTFHMNLSVLTVV 70

Query: 427 LEVHFSE 447
           L V FSE
Sbjct: 71  LIVQFSE 77


>U42831-1|AAA83513.2|  614|Caenorhabditis elegans Hypothetical
           protein R11B5.1 protein.
          Length = 614

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/53 (22%), Positives = 27/53 (50%)
 Frame = -3

Query: 505 RMYCGQNSRFGIYLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQE 347
           +M+  +N + G+     +  +     + ++  +E AH K+ +L  LEQ + +E
Sbjct: 194 KMFGSRNKQSGVMATTGLILEERPSGLPSKSADEAAHHKQMYLDILEQAKKKE 246


>Z82280-5|CAB05266.1|  294|Caenorhabditis elegans Hypothetical
           protein R05A10.5 protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 497 LWPEFTIWNLFGGHYTFSEKCTSNKSG 417
           LW ++T +    G +T + KC S+K+G
Sbjct: 129 LWSDYTGYQRINGQWTRTRKCLSDKAG 155


>Z81517-7|CAE11306.1|  329|Caenorhabditis elegans Hypothetical
           protein F28B1.8 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 475 GIYLAAIIHFQRNAPPIKAEDTNETAHEKKEFL 377
           GI   A+IH+  N+  IK   + +T   +K+FL
Sbjct: 202 GIIFIALIHWNMNSSTIKQVKSTQTRKMEKKFL 234


>Z48582-3|CAA88464.1|  401|Caenorhabditis elegans Hypothetical
           protein F27E5.1 protein.
          Length = 401

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 126 NKIISAHIGFNCYTTIYGSKVNLFRKIHHTII 221
           NK+  A++G     T+  SK NL +   HT+I
Sbjct: 348 NKLTRANVGMKGIFTVLSSKPNLNKTTVHTVI 379


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,989,259
Number of Sequences: 27780
Number of extensions: 213834
Number of successful extensions: 506
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)