Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00825X
         (585 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020...    30   1.6  
10_08_0325 - 16752288-16752712,16755256-16757653                       29   2.1  
01_07_0061 + 40818077-40818241,40818494-40818716,40819015-408192...    28   6.3  
12_02_0064 + 13104835-13105311,13107731-13108119,13108156-131082...    27   8.3  
10_05_0019 - 8049145-8049334,8059808-8060618,8060708-8060783,806...    27   8.3  
04_03_0062 - 10581175-10581879                                         27   8.3  
04_01_0620 - 8151065-8151791,8152246-8152418                           27   8.3  

>01_06_1805 -
           39999987-40000169,40000648-40000974,40001724-40002017,
           40002112-40002231,40002714-40002776,40003150-40003310,
           40003864-40004035
          Length = 439

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 21/60 (35%), Positives = 24/60 (40%)
 Frame = +1

Query: 406 YAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGPVVEGT*ASW 585
           Y K     Y NT  FH     P  + +   S  S   P     +  ATAGP   GT ASW
Sbjct: 180 YLKTGQCKYGNTCKFHH----PELFNAMASSRGSPIYPSV---HSSATAGPPYTGTMASW 232


>10_08_0325 - 16752288-16752712,16755256-16757653
          Length = 940

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 5   YYLQFNKNMFDSSIHEQY*QVISCSFIHI 91
           YYL  + N FD  + E + Q  S SF+H+
Sbjct: 367 YYLDLSGNSFDGELPEHWAQFKSLSFLHL 395


>01_07_0061 +
           40818077-40818241,40818494-40818716,40819015-40819263,
           40819455-40819505,40819611-40819871,40819994-40820046,
           40820234-40820348,40820475-40820696,40821280-40822253
          Length = 770

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 467 LRTNIRVPSKATTVPHARLQR 529
           +R N R P K T VPH RL R
Sbjct: 743 IRKNFRQPEKITCVPHNRLLR 763


>12_02_0064 +
           13104835-13105311,13107731-13108119,13108156-13108286,
           13108378-13108469,13108488-13109264,13109291-13109320
          Length = 631

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 513 TPGYNVGQSPGYGRTGGRGNLSEL 584
           TPGY    SPG+  TG   N S L
Sbjct: 449 TPGYTPTPSPGHNETGVESNSSPL 472


>10_05_0019 -
           8049145-8049334,8059808-8060618,8060708-8060783,
           8060856-8061008
          Length = 409

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 513 TPGYNVGQSPGYGRTGGRGNLSEL 584
           TPGY    SPG+  TG   N S L
Sbjct: 199 TPGYTPTPSPGHNETGVESNSSPL 222


>04_03_0062 - 10581175-10581879
          Length = 234

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 513 TPGYNVGQSPGYGRTGGRGNLSEL 584
           TPGY    SPG+  TG   N S L
Sbjct: 109 TPGYTPTPSPGHNETGVESNSSPL 132


>04_01_0620 - 8151065-8151791,8152246-8152418
          Length = 299

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 513 TPGYNVGQSPGYGRTGGRGNLSEL 584
           TPGY    SPG+  TG   N S L
Sbjct: 109 TPGYTPTPSPGHNETGVESNSSPL 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,415,300
Number of Sequences: 37544
Number of extensions: 268094
Number of successful extensions: 839
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)