BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00825X
(585 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein. 30 2.7
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro... 29 3.5
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro... 29 3.5
AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein. 29 3.5
AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein. 29 3.5
AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein. 29 3.5
AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein. 29 3.5
AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger re... 29 3.5
AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein. 29 3.5
AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein. 29 3.5
AY070618-1|AAL48089.1| 318|Drosophila melanogaster RE72002p pro... 29 3.5
AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p pro... 29 3.5
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA... 29 3.5
AE014134-3511|AAF57215.3| 318|Drosophila melanogaster CG3305-PA... 29 3.5
U17693-1|AAA75313.1| 629|Drosophila melanogaster dSR-CI protein... 29 4.6
BT023236-1|AAY55652.1| 294|Drosophila melanogaster IP02802p pro... 29 4.6
BT023208-1|AAY55624.1| 488|Drosophila melanogaster IP03002p pro... 29 4.6
BT011136-1|AAR82803.1| 806|Drosophila melanogaster GM09007p pro... 29 4.6
AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein. 29 4.6
AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein. 29 4.6
AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein. 29 4.6
AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein. 29 4.6
AY865070-2|AAW79472.1| 629|Drosophila melanogaster SR-CI protein. 29 4.6
AY865069-2|AAW79470.1| 629|Drosophila melanogaster SR-CI protein. 29 4.6
AY865068-2|AAW79468.1| 629|Drosophila melanogaster SR-CI protein. 29 4.6
AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein. 29 4.6
AY865060-2|AAW79452.1| 629|Drosophila melanogaster SR-CI protein. 29 4.6
AY864370-1|AAX38008.1| 572|Drosophila melanogaster scavenger re... 29 4.6
AY864369-1|AAX38007.1| 572|Drosophila melanogaster scavenger re... 29 4.6
AY864366-1|AAX38004.1| 572|Drosophila melanogaster scavenger re... 29 4.6
AY864365-1|AAX38003.1| 572|Drosophila melanogaster scavenger re... 29 4.6
AY864364-1|AAX38002.1| 572|Drosophila melanogaster scavenger re... 29 4.6
AY864363-1|AAX38001.1| 572|Drosophila melanogaster scavenger re... 29 4.6
AY349703-1|AAQ75562.1| 601|Drosophila melanogaster Sr-CI protein. 29 4.6
AY349702-1|AAQ75561.1| 601|Drosophila melanogaster Sr-CI protein. 29 4.6
AY349700-1|AAQ75559.1| 601|Drosophila melanogaster Sr-CI protein. 29 4.6
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 29 4.6
AF221506-2|AAF37565.1| 629|Drosophila melanogaster scavenger re... 29 4.6
AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule ... 29 4.6
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 29 4.6
AE014134-2836|ABI31320.1| 353|Drosophila melanogaster CG5020-PG... 29 4.6
AE014134-2835|ABI31321.1| 390|Drosophila melanogaster CG5020-PF... 29 4.6
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 29 4.6
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 29 4.6
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 29 4.6
AE014134-699|AAF51042.1| 629|Drosophila melanogaster CG4099-PA ... 29 4.6
BT022722-1|AAY55138.1| 342|Drosophila melanogaster RH14732p pro... 29 6.1
AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein. 29 6.1
AY094683-1|AAM11036.1| 281|Drosophila melanogaster GH07387p pro... 29 6.1
AE014298-659|AAF45972.1| 342|Drosophila melanogaster CG3009-PA ... 29 6.1
AE014297-4071|AAF56668.1| 554|Drosophila melanogaster CG5815-PB... 28 8.1
AE014297-4070|AAN14396.1| 581|Drosophila melanogaster CG5815-PA... 28 8.1
>AY865073-2|AAW79477.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 397 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
+ D PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 389 TEDDISSVPPTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKAT 440
>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin protein.
Length = 1840
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 385 SRNISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGPVV 564
S + SS + ++P +T+S + T +S+ ++ STT TT QAT P +
Sbjct: 1547 SSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSSTTSTTTTTTTTQATPPPEI 1606
Query: 565 EGT 573
T
Sbjct: 1607 RST 1609
>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p protein.
Length = 1840
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 385 SRNISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGPVV 564
S + SS + ++P +T+S + T +S+ ++ STT TT QAT P +
Sbjct: 1547 SSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSSTTSTTTTTTTTQATPPPEI 1606
Query: 565 EGT 573
T
Sbjct: 1607 RST 1609
>AY865067-2|AAW79466.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKAT 440
>AY865066-2|AAW79464.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKAT 440
>AY865063-2|AAW79458.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 397 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
+ D PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 389 TEDDISSVPPTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY865062-2|AAW79456.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKAT 440
>AY864368-1|AAX38006.1| 575|Drosophila melanogaster scavenger
receptor protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 341 PTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKAT 383
>AY349704-1|AAQ75563.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 397 PTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKAT 439
>AY349701-1|AAQ75560.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 397 PTVTSTSTSTTRKSTTTTTTSTTSTSTTTTKRPTTTTTTTKAT 439
>AY070618-1|AAL48089.1| 318|Drosophila melanogaster RE72002p
protein.
Length = 318
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +1
Query: 388 RNISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGPVVE 567
+N+S + + A+P ++S+ + T K +T ++ T R T +T PV+
Sbjct: 36 KNVSDLFLEQANPLTSSSSTISTSSTTTEKPITTRSTSTITPRSTTPSTESPSTTAPVIS 95
Query: 568 GT 573
T
Sbjct: 96 TT 97
>AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p
protein.
Length = 934
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 385 SRNISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGPVV 564
S + SS + ++P +T+S + T +S+ ++ STT TT QAT P +
Sbjct: 641 SSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSSTTSTTTTTTTTQATPPPEI 700
Query: 565 EGT 573
T
Sbjct: 701 RST 703
>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
protein.
Length = 1837
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 385 SRNISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGPVV 564
S + SS + ++P +T+S + T +S+ ++ STT TT QAT P +
Sbjct: 1544 SSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSSTTSTTTTTTTTQATPPPEI 1603
Query: 565 EGT 573
T
Sbjct: 1604 RST 1606
>AE014134-3511|AAF57215.3| 318|Drosophila melanogaster CG3305-PA
protein.
Length = 318
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +1
Query: 388 RNISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGPVVE 567
+N+S + + A+P ++S+ + T K +T ++ T R T +T PV+
Sbjct: 36 KNVSDLFLEQANPLTSSSSTISTSSTTTEKPITTRSTSTITPRSTTPSTESPSTTAPVIS 95
Query: 568 GT 573
T
Sbjct: 96 TT 97
>U17693-1|AAA75313.1| 629|Drosophila melanogaster dSR-CI protein
precursor protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>BT023236-1|AAY55652.1| 294|Drosophila melanogaster IP02802p
protein.
Length = 294
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 63 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 105
>BT023208-1|AAY55624.1| 488|Drosophila melanogaster IP03002p
protein.
Length = 488
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 257 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 299
>BT011136-1|AAR82803.1| 806|Drosophila melanogaster GM09007p
protein.
Length = 806
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3
Query: 301 LEETQFCPGNWC 266
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AY865078-2|AAW79487.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY865076-2|AAW79483.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY865074-2|AAW79479.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY865072-1|AAW79476.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY865070-2|AAW79472.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY865069-2|AAW79470.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY865068-2|AAW79468.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY865064-2|AAW79460.1| 632|Drosophila melanogaster SR-CI protein.
Length = 632
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY865060-2|AAW79452.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AY864370-1|AAX38008.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 341 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 383
>AY864369-1|AAX38007.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 341 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 383
>AY864366-1|AAX38004.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 341 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 383
>AY864365-1|AAX38003.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 341 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 383
>AY864364-1|AAX38002.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 341 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 383
>AY864363-1|AAX38001.1| 572|Drosophila melanogaster scavenger
receptor protein.
Length = 572
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 341 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 383
>AY349703-1|AAQ75562.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 397 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 439
>AY349702-1|AAQ75561.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 397 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 439
>AY349700-1|AAQ75559.1| 601|Drosophila melanogaster Sr-CI protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 397 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 439
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p
protein.
Length = 1689
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3
Query: 301 LEETQFCPGNWC 266
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AF221506-2|AAF37565.1| 629|Drosophila melanogaster scavenger
receptor protein CIprecursor protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule
binding protein D-CLIP-190 protein.
Length = 1690
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3
Query: 301 LEETQFCPGNWC 266
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3
Query: 301 LEETQFCPGNWC 266
L ETQF PGNWC
Sbjct: 221 LGETQFAPGNWC 232
>AE014134-2836|ABI31320.1| 353|Drosophila melanogaster CG5020-PG,
isoform G protein.
Length = 353
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3
Query: 301 LEETQFCPGNWC 266
L ETQF PGNWC
Sbjct: 192 LGETQFAPGNWC 203
>AE014134-2835|ABI31321.1| 390|Drosophila melanogaster CG5020-PF,
isoform F protein.
Length = 390
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3
Query: 301 LEETQFCPGNWC 266
L ETQF PGNWC
Sbjct: 192 LGETQFAPGNWC 203
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3
Query: 301 LEETQFCPGNWC 266
L ETQF PGNWC
Sbjct: 246 LGETQFAPGNWC 257
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3
Query: 301 LEETQFCPGNWC 266
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3
Query: 301 LEETQFCPGNWC 266
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AE014134-699|AAF51042.1| 629|Drosophila melanogaster CG4099-PA
protein.
Length = 629
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTTTTTKAT 440
>BT022722-1|AAY55138.1| 342|Drosophila melanogaster RH14732p
protein.
Length = 342
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = +3
Query: 492 PKQLQYHTPGYNV-----GQSPGYGRTGGRG 569
P +YH PGY+ G S GYG+ GRG
Sbjct: 303 PPPQRYHDPGYHYERPGPGSSYGYGQYSGRG 333
>AY865077-2|AAW79485.1| 629|Drosophila melanogaster SR-CI protein.
Length = 629
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 424 PTYQNTSSFHSEKMTPHKYTSTVQSNYSTT-RPVTTWDNRQAT 549
PT +TS+ + K T TST ++ +TT RP TT +AT
Sbjct: 398 PTVTSTSTSTTRKSTTTTTTSTTTTSTTTTKRPTTTATTTKAT 440
>AY094683-1|AAM11036.1| 281|Drosophila melanogaster GH07387p
protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = +3
Query: 492 PKQLQYHTPGYNV-----GQSPGYGRTGGRG 569
P +YH PGY+ G S GYG+ GRG
Sbjct: 242 PPPQRYHDPGYHYERPGPGSSYGYGQYSGRG 272
>AE014298-659|AAF45972.1| 342|Drosophila melanogaster CG3009-PA
protein.
Length = 342
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = +3
Query: 492 PKQLQYHTPGYNV-----GQSPGYGRTGGRG 569
P +YH PGY+ G S GYG+ GRG
Sbjct: 303 PPPQRYHDPGYHYERPGPGSSYGYGQYSGRG 333
>AE014297-4071|AAF56668.1| 554|Drosophila melanogaster CG5815-PB,
isoform B protein.
Length = 554
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 397 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGP 558
S + KP +P +S+ + + + ++S +S+ S++RP T + Q TA P
Sbjct: 338 SDSFKKPTAPQPTKSSASSTSLSSSNSHSSASRSSVSSSRPAT--KSAQLTARP 389
>AE014297-4070|AAN14396.1| 581|Drosophila melanogaster CG5815-PA,
isoform A protein.
Length = 581
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 397 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGP 558
S + KP +P +S+ + + + ++S +S+ S++RP T + Q TA P
Sbjct: 338 SDSFKKPTAPQPTKSSASSTSLSSSNSHSSASRSSVSSSRPAT--KSAQLTARP 389
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,045,653
Number of Sequences: 53049
Number of extensions: 459708
Number of successful extensions: 1561
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1559
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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