Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00825X
         (585 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69663-1|CAA93511.1|  636|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical pr...    28   4.2  
U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical p...    28   4.2  
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p...    28   4.2  
Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    28   5.6  
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter...    27   9.8  
U21321-11|AAG00044.1|  460|Caenorhabditis elegans Hypothetical p...    27   9.8  

>Z69663-1|CAA93511.1|  636|Caenorhabditis elegans Hypothetical
           protein K02B9.1 protein.
          Length = 636

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 420 FANLPKHKLIPLREDDSAQIYEYRPKQLQYHTPGYNV 530
           F++ PKH+L+ L +     +Y+Y  K +Q    G N+
Sbjct: 407 FSDAPKHQLLKLAKTLKPMLYDYWRKTMQMQNRGANI 443


>U12966-6|AAM48533.1|  783|Caenorhabditis elegans Hypothetical
           protein F54D8.6 protein.
          Length = 783

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 341 LPDELRRPGEVPLPRGDPVLPGELVRP 261
           +PDELR  G VP+    P +P E + P
Sbjct: 353 IPDELRNLGAVPVVTSIPTIPNEFLPP 379


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = +1

Query: 394 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGPVVEGT 573
           +S    KP  P+  +T  F     +  + TST  ++ STT   TT      T  P    T
Sbjct: 175 MSPQSPKPTYPSVPSTFEFEKYPKSTEEPTSTPSTSTSTTTTTTTSTTTTTTEAPTTTTT 234


>Z82261-7|CAH60757.2|  300|Caenorhabditis elegans Hypothetical
           protein C35D6.10 protein.
          Length = 300

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 55  VLTSNFLLIYTYLAVQLCHLLFVL 126
           +LT+N   I+ YL   +C+ LF++
Sbjct: 81  ILTNNRFFIFKYLTFSICYFLFII 104


>U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical
           protein F19F10.11b protein.
          Length = 868

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/24 (50%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = -2

Query: 344 RLPDELR-RPGEVPLPRGDPVLPG 276
           +LP+E++ +PGE+ L   DP+LPG
Sbjct: 31  QLPEEIKLKPGEMILVPDDPMLPG 54


>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
           protein F19F10.11a protein.
          Length = 1121

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/24 (50%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = -2

Query: 344 RLPDELR-RPGEVPLPRGDPVLPG 276
           +LP+E++ +PGE+ L   DP+LPG
Sbjct: 31  QLPEEIKLKPGEMILVPDDPMLPG 54


>Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical
           protein C49C3.13 protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 415 PASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTTRPVTT 528
           P + T  +T++F +  +T    T+T  +  +TT+P TT
Sbjct: 319 PTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKPTTT 356


>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 394 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNY 504
           + + Y  PA+ T  N+S + +   +P  Y +  QS+Y
Sbjct: 391 VPTSYYPPAASTASNSSGYQAPYYSPPSYPTQQQSSY 427


>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
            wild-typeprotein 6 protein.
          Length = 1254

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 451  HSEKMTPHKYTSTVQSNYSTTRPVTTWDNRQATAGPVVEGT 573
            H   + P + TS V ++ +TT P+TT +         +E T
Sbjct: 938  HKTTVKPAETTSAVAASTTTTEPITTTEKSTTLETTPIEAT 978


>U21321-11|AAG00044.1|  460|Caenorhabditis elegans Hypothetical
           protein ZK177.1 protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 453 LREDDSAQIYEYRPKQLQYHTPGYNVGQSPGYGRTGG 563
           ++ +DS  IYEY   Q  Y   G N G   G+ +  G
Sbjct: 395 VQSEDSEGIYEYFVDQPNYSNQGTNQGTCQGFIQING 431


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,257,280
Number of Sequences: 27780
Number of extensions: 234392
Number of successful extensions: 748
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)