Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00823X
         (562 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455...    28   5.9  
02_05_1018 - 33530834-33530926,33531036-33531098,33531193-335312...    28   5.9  
01_06_1061 - 34169469-34169624,34170837-34170938,34171029-341711...    28   5.9  

>07_03_0356 -
           17142019-17142899,17145251-17145290,17145381-17145512,
           17145762-17145815,17145913-17145993,17146860-17146955,
           17147439-17147611,17147750-17147823,17148515-17148622,
           17148693-17148868,17149305-17149352,17150665-17150775,
           17152172-17152226,17153434-17153534,17154176-17154290,
           17155505-17155698
          Length = 812

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -2

Query: 357 GRVILKMTKIQLNTEKSSPESSWKRKRQAQAKSIEARAKKMK 232
           GR++ +  KI+   E+     + KR ++ QA+  + RAK+ K
Sbjct: 662 GRLLSEKKKIEEAEERKKAREAKKRAKEVQAQKEKERAKQKK 703


>02_05_1018 -
           33530834-33530926,33531036-33531098,33531193-33531236,
           33531973-33532118,33532262-33532281,33532365-33532500,
           33532585-33532804,33532905-33533085,33533495-33533518,
           33534127-33534341,33534425-33534705,33535987-33536210
          Length = 548

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 16  LYSIVIIKSLYSYCEEYRVSRGYIKLW*NTLIIFAGIGYE 135
           L SI++   LYSYC E+ +  G      N   IF+ IG++
Sbjct: 238 LISIILYTELYSYCVEFIILEGD-----NMTSIFSHIGFD 272


>01_06_1061 -
           34169469-34169624,34170837-34170938,34171029-34171180,
           34172087-34172153,34172239-34172419,34172655-34172778,
           34174775-34174871,34175929-34176331,34176729-34176888,
           34177412-34177486,34177714-34177892,34178224-34178303,
           34178561-34179322
          Length = 845

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 230 TFIFFARASILFACAWRFLFHELSGLL 310
           +FI+ A   +LF+  WR +   LSG+L
Sbjct: 752 SFIYLAGLQLLFSSGWRSIIPGLSGIL 778


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,778,259
Number of Sequences: 37544
Number of extensions: 260114
Number of successful extensions: 549
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)