Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00822
         (427 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29096-2|AAX88830.1|  133|Caenorhabditis elegans Hypothetical pr...    27   5.6  
AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical ...    27   7.4  
AF022967-12|AAB69873.2|  467|Caenorhabditis elegans Hypothetical...    27   7.4  
Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical pr...    26   9.8  
Z81034-5|CAB02730.1|  198|Caenorhabditis elegans Hypothetical pr...    26   9.8  

>U29096-2|AAX88830.1|  133|Caenorhabditis elegans Hypothetical
           protein F30H5.5 protein.
          Length = 133

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 2   TSGAFVLKRCTG-VRIPQAGTNFSNEICTQQMFTIDFHGEGI 124
           TS A +L+     ++  Q  T   NE  T+Q+FT+D++   I
Sbjct: 23  TSDAEILEITNAHIKAIQVATRSMNETATRQLFTLDYNNPKI 64


>AF078788-1|AAC26965.2|  629|Caenorhabditis elegans Hypothetical
           protein ZC190.4 protein.
          Length = 629

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 237 HGRNKQGGGTYPRGLTRGPTTSNYANYNFAGLIFNHDVIPS 115
           H RN +G G +  G  +    SN + YN  G    H V+P+
Sbjct: 138 HFRNNRGNGGHLNGHQQNIQNSNRSGYNM-GNNSQHTVVPT 177


>AF022967-12|AAB69873.2|  467|Caenorhabditis elegans Hypothetical
           protein C13A2.1 protein.
          Length = 467

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -2

Query: 177 TSNYANYNFAGLIFNHDVIPSPWKSIVNIC*VHISLEKLVPACGIRTPVHRFNTN 13
           TS     N   L+ + ++ P+P  S  +   + IS E    +  +RTP H+ N N
Sbjct: 65  TSKSLGDNALALLMSINLPPTPHFSTPDFKEIIISAENSTSSIVVRTPHHKVNYN 119


>Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical
           protein K01G5.10 protein.
          Length = 248

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 150 AGLIFNHDVIPSPWKSI 100
           AG ++NH   P PWK +
Sbjct: 110 AGALYNHYATPEPWKLV 126


>Z81034-5|CAB02730.1|  198|Caenorhabditis elegans Hypothetical
           protein C15C6.4 protein.
          Length = 198

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +2

Query: 56  GTNFSNEICTQQMFTIDFHGEGITSWLKIKPAKL*FA*LLVV 181
           G +FS+    + +   D+HG  +T WL   P ++  + ++V+
Sbjct: 81  GNHFSSTKIEKTILKSDYHGALLTIWLAENPTQIGISGIVVL 122


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,265,786
Number of Sequences: 27780
Number of extensions: 210275
Number of successful extensions: 440
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)