Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00819
         (478 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   2.4  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           23   5.5  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    22   9.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    22   9.6  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 269 FPLRWCLQQKIPLPISQVCSPDSSALRNSVLV*N 168
           FP+ W  Q+ + LP       D+SALR   L+ N
Sbjct: 445 FPIPWKRQKLVLLPKPGKPPDDASALRPLALIDN 478


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 109 VRLQLSLLHSNRLNKFFVMIFYTRTEFLKAELSGLQT 219
           V L+   L  NR+      IFY     L  +LS + T
Sbjct: 17  VNLEYLFLSHNRITTLPAEIFYPLRSLLHLDLSNMDT 53


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 52  CASFIFVIKGAFYLVSASTVRLQLSLLHSNRLNKFFVMI 168
           C    F+    FYL S S  ++ LS+     L+ FF+++
Sbjct: 254 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLV 292


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 52  CASFIFVIKGAFYLVSASTVRLQLSLLHSNRLNKFFVMI 168
           C    F+    FYL S S  ++ LS+     L+ FF+++
Sbjct: 254 CMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLV 292


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,631
Number of Sequences: 2352
Number of extensions: 6874
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)