Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00818
         (802 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding pr...    26   1.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   3.6  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    23   8.3  

>AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP22 protein.
          Length = 131

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 219 FTCVRGADRARPQVARRGGE*PHRPTTHC 305
           F  V+GA     +V  R  E P  P THC
Sbjct: 20  FNAVQGAANDELKVHYRANEFPDDPVTHC 48


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 533 SQ*DIPSKYNTLAHV**YNKKRRHEIYLKATTISKHSKTL 414
           +Q ++   YNT+AHV    +++ HE   K +  ++  K L
Sbjct: 465 AQREVDLMYNTMAHVKDAREEKHHERCAKQSETTRIEKQL 504


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
           protein OBPjj83b protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 228 VRGADRARPQVARRGGE*PHRPTTHC 305
           V+GA     +V  R  E P  P THC
Sbjct: 36  VQGAANDELKVHYRANEFPDDPVTHC 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,431
Number of Sequences: 2352
Number of extensions: 15579
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)