Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00813
         (702 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC057783-1|AAH57783.1|  275|Homo sapiens SFRS2B protein protein.       30   7.0  
AK057946-1|BAB71619.1|  517|Homo sapiens protein ( Homo sapiens ...    30   7.0  
AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein.     30   7.0  
AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein.     30   7.0  
AJ583824-1|CAE47751.1| 1072|Homo sapiens ubiquitin specific prot...    30   9.2  
AB037771-1|BAA92588.1|  911|Homo sapiens KIAA1350 protein protein.     30   9.2  

>BC057783-1|AAH57783.1|  275|Homo sapiens SFRS2B protein protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = -3

Query: 502 QMAPSGRRRLDHSKYGAQPFGVLSSQRSRVRGHSCTPMRSRTRGQGA 362
           Q  P GR R     YG +        RSR RG SC+  RSR+R +G+
Sbjct: 102 QGEPRGRSR--GGGYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGS 146


>AK057946-1|BAB71619.1|  517|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25217 fis, clone REC08938, highly similar to
           Oryctolagus cuniculus Na+/glucose cotransporter-related
           protein ).
          Length = 517

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 305 PVSNTGYVSAFVPVQSAAGCALTACSAPHWCAAMPSY 415
           P  ++ Y+S F     A+G A T  S P +C + P Y
Sbjct: 19  PQRSSPYLSTFRSATGASGSACTCLSCPCYCLSSPRY 55


>AF160252-1|AAF03681.1| 1089|Homo sapiens KIAA0553 protein protein.
          Length = 1089

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = -3

Query: 490 SGRRRLDHSKYGAQPFGV-LSSQRSRVRGHSCTPMRSRTRGQG-ATRCTLYWHKRRNIS- 320
           S + R    KY +      LS  +SR R  S T  RSR+RG+  ++ C+    KRR+ S 
Sbjct: 505 SSKHRSKRHKYSSSDDDYSLSCSQSRSRSRSHTRERSRSRGRSRSSSCSRSRSKRRSRST 564

Query: 319 CIRNWQ 302
              +WQ
Sbjct: 565 TAHSWQ 570


>AB011125-1|BAA25479.2| 1450|Homo sapiens KIAA0553 protein protein.
          Length = 1450

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = -3

Query: 490  SGRRRLDHSKYGAQPFGV-LSSQRSRVRGHSCTPMRSRTRGQG-ATRCTLYWHKRRNIS- 320
            S + R    KY +      LS  +SR R  S T  RSR+RG+  ++ C+    KRR+ S 
Sbjct: 866  SSKHRSKRHKYSSSDDDYSLSCSQSRSRSRSHTRERSRSRGRSRSSSCSRSRSKRRSRST 925

Query: 319  CIRNWQ 302
               +WQ
Sbjct: 926  TAHSWQ 931


>AJ583824-1|CAE47751.1| 1072|Homo sapiens ubiquitin specific
           proteinase 53 protein.
          Length = 1072

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
 Frame = -3

Query: 595 IFNTQNKQSFKVDGIMHYGGVYVKAQ*FSTPQMAPSGRRRLDHSKY-GAQPFGVLSSQRS 419
           ++++Q K S+K D ++       +    S  Q+   G +     K      +   SSQ S
Sbjct: 506 LYHSQGKGSYKHDRVVPQSRASAQIISSSKSQILAPGEKITGKVKSDNGTGYDTDSSQDS 565

Query: 418 RVRGHSC-TPMRSRTRGQGATRCTL 347
           R RG+SC +  +SR RG    R TL
Sbjct: 566 RDRGNSCDSSSKSRNRGWKPMRETL 590


>AB037771-1|BAA92588.1|  911|Homo sapiens KIAA1350 protein protein.
          Length = 911

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
 Frame = -3

Query: 595 IFNTQNKQSFKVDGIMHYGGVYVKAQ*FSTPQMAPSGRRRLDHSKY-GAQPFGVLSSQRS 419
           ++++Q K S+K D ++       +    S  Q+   G +     K      +   SSQ S
Sbjct: 345 LYHSQGKGSYKHDRVVPQSRASAQIISSSKSQILAPGEKITGKVKSDNGTGYDTDSSQDS 404

Query: 418 RVRGHSC-TPMRSRTRGQGATRCTL 347
           R RG+SC +  +SR RG    R TL
Sbjct: 405 RDRGNSCDSSSKSRNRGWKPMRETL 429


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,608,929
Number of Sequences: 237096
Number of extensions: 1860078
Number of successful extensions: 8870
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8858
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)