Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00813
(702 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.92
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.92
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.6
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 2.8
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 22 4.9
AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor pro... 22 4.9
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 6.5
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 6.5
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 6.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.5
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.92
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -1
Query: 144 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAVE 7
VP+L + + AM L S V VV + +HFR Q H MAP V+
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHK---MAPWVK 346
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.92
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = -1
Query: 144 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAVE 7
VP+L + + AM L S V VV + +HFR Q H MAP V+
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNVHFRSPQTHK---MAPWVK 346
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 1.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 144 VPMLEQVEV*AMKLTLAS*EVEVV*VILHFRGNQQHMEEVMAPAV 10
VP+L + + M L S V VV + +HFR Q H VMAP V
Sbjct: 300 VPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTH---VMAPWV 341
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 332 AFVPVQSAAGCALTACSAPHW 394
AF P+ G + CSAP W
Sbjct: 533 AFSPLSLLGGPLVMVCSAPVW 553
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein.
Length = 53
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +3
Query: 183 CSPLTLAHPPVAPEPPRKPFKLF 251
C+ P P+P R+PF F
Sbjct: 15 CAAFAYVPLPNVPQPGRRPFPTF 37
>AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor
protein.
Length = 33
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +3
Query: 183 CSPLTLAHPPVAPEPPRKPFKLF 251
C+ P P+P R+PF F
Sbjct: 1 CAAFAYVPLPNVPQPGRRPFPTF 23
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +3
Query: 519 CALTYTPP*CIMPSTLNDCLFCVLNIRMY 605
CAL TP ++ S+++ + C++ + +Y
Sbjct: 184 CALDLTPTYAVVSSSISFYVPCIVMLGIY 212
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 522 HSDLARPRWR 493
+SDL RP WR
Sbjct: 38 YSDLVRPHWR 47
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 106 FHCLHLYLFKHWYSRQQNL*IYQYGDV 186
F+ L+ + + QQ+L +YQY D+
Sbjct: 434 FYQLYKKVMNLYQQYQQSLPVYQYNDL 460
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 469 HSKYGAQPFGVLSSQRSRVRGHSCTPMRSRTRGQGATRCT 350
+++ G++P VLS R+R+ G G RC+
Sbjct: 272 YAQTGSEPMLVLSGPRTRLLGSVLALEAVTLEDNGIYRCS 311
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -3
Query: 469 HSKYGAQPFGVLSSQRSRVRGHSCTPMRSRTRGQGATRCT 350
+++ G++P VLS R+R+ G G RC+
Sbjct: 272 YAQTGSEPMLVLSGPRTRLLGSVLALEAVTLEDNGIYRCS 311
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,229
Number of Sequences: 438
Number of extensions: 3321
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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