Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00809
         (715 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    30   2.7  
AY070882-1|AAL48504.1|  518|Drosophila melanogaster LD16673p pro...    29   8.3  
AY060442-1|AAL25481.1|  518|Drosophila melanogaster LD47433p pro...    29   8.3  
AE013599-1652|AAF58414.3|  518|Drosophila melanogaster CG17724-P...    29   8.3  

>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
            protein.
          Length = 4498

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 25/95 (26%), Positives = 42/95 (44%)
 Frame = +3

Query: 168  IGRGLVHHVDYWGEGKVTNLDRVRGFRRSTM*TNSLRSSVRATARESKYPTGFPSCLWTT 347
            I  G V  V   G  +  N D  R  + +T  T ++ S + + A  S       +   TT
Sbjct: 4328 ISSGAVSSVAIGGNTQTANADNAR--QENTQSTGTITSEISSGAISSDNHNHIGT--QTT 4383

Query: 348  ATLPVTSETAALKLLPSARGRSVSGALQTSPGLST 452
            AT+  +SET   ++  +    ++SG +  S  L+T
Sbjct: 4384 ATIDSSSETTPTQISTTISSGAISGHIDGSINLNT 4418


>AY070882-1|AAL48504.1|  518|Drosophila melanogaster LD16673p
           protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
 Frame = +2

Query: 443 IVNASEGLVVAYGYSENSDDI--QISSVSLVKRAYTMEPGTNCPQT*RPRRNSAQKWSLP 616
           +VN     V A GY EN DDI  +++   LV+     EP    P+       +    S  
Sbjct: 316 VVNLVSSGVEASGYIENDDDIIEELNEDDLVEEIIDEEPSQEQPELQETTTANGLDLSST 375

Query: 617 TQGQSTITCTTWLRA 661
               +T T T  L A
Sbjct: 376 NNATATTTGTAMLLA 390


>AY060442-1|AAL25481.1|  518|Drosophila melanogaster LD47433p
           protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
 Frame = +2

Query: 443 IVNASEGLVVAYGYSENSDDI--QISSVSLVKRAYTMEPGTNCPQT*RPRRNSAQKWSLP 616
           +VN     V A GY EN DDI  +++   LV+     EP    P+       +    S  
Sbjct: 316 VVNLVSSGVEASGYIENDDDIIEELNEDDLVEEIIDEEPSQEQPELQETTTANGLDLSST 375

Query: 617 TQGQSTITCTTWLRA 661
               +T T T  L A
Sbjct: 376 NNATATTTGTAMLLA 390


>AE013599-1652|AAF58414.3|  518|Drosophila melanogaster CG17724-PA,
           isoform A protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
 Frame = +2

Query: 443 IVNASEGLVVAYGYSENSDDI--QISSVSLVKRAYTMEPGTNCPQT*RPRRNSAQKWSLP 616
           +VN     V A GY EN DDI  +++   LV+     EP    P+       +    S  
Sbjct: 316 VVNLVSSGVEASGYIENDDDIIEELNEDDLVEEIIDEEPSQEQPELQETTTANGLDLSST 375

Query: 617 TQGQSTITCTTWLRA 661
               +T T T  L A
Sbjct: 376 NNATATTTGTAMLLA 390


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,736,274
Number of Sequences: 53049
Number of extensions: 762503
Number of successful extensions: 2374
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2374
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)