Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00806
(665 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 140 5e-33
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 140 5e-33
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 46 2e-04
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 30 6.5
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 62/85 (72%), Positives = 76/85 (89%)
Frame = -2
Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESN
Sbjct: 42 RKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESN 101
Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
A+ K LDVD LVI+HIQVN+AP +R
Sbjct: 102 AELKGLDVDSLVIEHIQVNKAPKMR 126
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -3
Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKM 514
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGM 39
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 156
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 62/85 (72%), Positives = 76/85 (89%)
Frame = -2
Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESN
Sbjct: 42 RKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESN 101
Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
A+ K LDVD LVI+HIQVN+AP +R
Sbjct: 102 AELKGLDVDSLVIEHIQVNKAPKMR 126
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -3
Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKM 514
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGM 39
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 156
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 62/85 (72%), Positives = 76/85 (89%)
Frame = -2
Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESN
Sbjct: 42 RKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESN 101
Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
A+ K LDVD LVI+HIQVN+AP +R
Sbjct: 102 AELKGLDVDSLVIEHIQVNKAPKMR 126
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -3
Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKM 514
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGM 39
Score = 57.6 bits (133), Expect = 4e-08
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = -1
Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 156
RRTYRA GRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRARGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 62/85 (72%), Positives = 76/85 (89%)
Frame = -2
Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESN
Sbjct: 42 RKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESN 101
Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
A+ K LDVD LVI+HIQVN+AP +R
Sbjct: 102 AELKGLDVDSLVIEHIQVNKAPKMR 126
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -3
Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKM 514
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGM 39
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 156
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 62/85 (72%), Positives = 76/85 (89%)
Frame = -2
Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESN
Sbjct: 42 RKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESN 101
Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
A+ K LDVD LVI+HIQVN+AP +R
Sbjct: 102 AELKGLDVDSLVIEHIQVNKAPKMR 126
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -3
Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKM 514
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGM 39
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 156
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 62/85 (72%), Positives = 76/85 (89%)
Frame = -2
Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESN
Sbjct: 42 RKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESN 101
Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
A+ K LDVD LVI+HIQVN+AP +R
Sbjct: 102 AELKGLDVDSLVIEHIQVNKAPKMR 126
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -3
Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKM 514
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGM 39
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 156
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 140 bits (338), Expect = 5e-33
Identities = 62/85 (72%), Positives = 76/85 (89%)
Frame = -2
Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
R+A +YLK+V +K+C+PFRR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESN
Sbjct: 42 RKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESN 101
Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
A+ K LDVD LVI+HIQVN+AP +R
Sbjct: 102 AELKGLDVDSLVIEHIQVNKAPKMR 126
Score = 65.7 bits (153), Expect = 1e-10
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -3
Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKM 514
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGM 39
Score = 60.9 bits (141), Expect = 4e-09
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -1
Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVAR 156
RRTYRAHGRINPYMSSPCHIE+ L+E+E V +
Sbjct: 127 RRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 45.6 bits (103), Expect = 2e-04
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = -1
Query: 248 TYRAHGRINPYMSSPCHIEVCLSER 174
TYRAHG+INPY++S CHIE+ L+E+
Sbjct: 65 TYRAHGQINPYVTSACHIEMILTEK 89
Score = 39.5 bits (88), Expect = 0.011
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = -2
Query: 382 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAP 263
PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAP 59
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -3
Query: 273 IARPAYETYIPCSRSHQPLHVVSLPHRSMSQRTRRCCRQGSP 148
+ RP YI C R + P + S+ + ++ CCR +P
Sbjct: 104 VYRPGDCVYIVCRRPNTPYFICSIQDFKLVHNSQACCRSPTP 145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,177,936
Number of Sequences: 237096
Number of extensions: 1827334
Number of successful extensions: 4136
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4136
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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