Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00806
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p pro...   153   2e-37
AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,...   153   2e-37
AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,...   153   2e-37
AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,...   153   2e-37
AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,...   153   2e-37
AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-P...    32   0.81 

>AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p
           protein.
          Length = 186

 Score =  153 bits (372), Expect = 2e-37
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -2

Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
           RRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+N
Sbjct: 42  RRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEAN 101

Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
           AD K LD DRLV+ HIQVNRA CLR
Sbjct: 102 ADCKGLDADRLVVHHIQVNRAQCLR 126



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPL 508
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPL
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPL 41



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -1

Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 129
           RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PA
Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166


>AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,
           isoform D protein.
          Length = 186

 Score =  153 bits (372), Expect = 2e-37
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -2

Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
           RRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+N
Sbjct: 42  RRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEAN 101

Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
           AD K LD DRLV+ HIQVNRA CLR
Sbjct: 102 ADCKGLDADRLVVHHIQVNRAQCLR 126



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPL 508
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPL
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPL 41



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -1

Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 129
           RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PA
Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166


>AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,
           isoform C protein.
          Length = 186

 Score =  153 bits (372), Expect = 2e-37
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -2

Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
           RRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+N
Sbjct: 42  RRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEAN 101

Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
           AD K LD DRLV+ HIQVNRA CLR
Sbjct: 102 ADCKGLDADRLVVHHIQVNRAQCLR 126



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPL 508
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPL
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPL 41



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -1

Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 129
           RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PA
Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166


>AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,
           isoform B protein.
          Length = 186

 Score =  153 bits (372), Expect = 2e-37
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -2

Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
           RRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+N
Sbjct: 42  RRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEAN 101

Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
           AD K LD DRLV+ HIQVNRA CLR
Sbjct: 102 ADCKGLDADRLVVHHIQVNRAQCLR 126



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPL 508
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPL
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPL 41



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -1

Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 129
           RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PA
Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166


>AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,
           isoform A protein.
          Length = 186

 Score =  153 bits (372), Expect = 2e-37
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -2

Query: 508 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESN 329
           RRA RYLK VI++KEC+PFRRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQLLRNAE+N
Sbjct: 42  RRAQRYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEAN 101

Query: 328 ADNKTLDVDRLVIDHIQVNRAPCLR 254
           AD K LD DRLV+ HIQVNRA CLR
Sbjct: 102 ADCKGLDADRLVVHHIQVNRAQCLR 126



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = -3

Query: 630 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPL 508
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI++MPL
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPL 41



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -1

Query: 254 RRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPA 129
           RRTYRAHGRINPYMSSPCH+EV L+E+E+ V++   TDD PA
Sbjct: 127 RRTYRAHGRINPYMSSPCHVEVILTEKEELVSKA--TDDEPA 166


>AE014297-2740|AAF55726.2| 1491|Drosophila melanogaster CG31213-PA
           protein.
          Length = 1491

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +1

Query: 40  CINLLFNPYVYSLIIFSF*RASFFLESFFFAGASSVGATLATASSRSL 183
           C+  +F  Y++SL++F     +FF+ SFF    S+V AT+    S +L
Sbjct: 98  CLMTIFLVYIHSLVLF-----AFFISSFFSRSLSAVVATILMYFSTAL 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,320,981
Number of Sequences: 53049
Number of extensions: 584323
Number of successful extensions: 1773
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1772
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)