Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00803
(483 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733 43 1e-04
10_07_0172 + 13804803-13805293,13805423-13805537,13805766-138058... 33 0.12
07_01_0064 + 463358-464341 33 0.12
04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016 33 0.12
01_06_1677 + 39092268-39092306,39092395-39092447,39094259-390943... 33 0.16
05_01_0064 + 454786-455646,456537-456752 32 0.21
05_05_0319 - 24080914-24080929,24082320-24082621,24082666-240827... 32 0.28
04_01_0548 + 7103540-7103972,7104081-7104667 32 0.28
06_03_0575 + 22431744-22432212,22432473-22433077 31 0.37
01_07_0339 + 42848065-42848943,42849308-42849526 31 0.37
12_01_0990 + 10052430-10052895,10053633-10054219 31 0.64
04_01_0562 + 7212504-7212849,7212946-7213544 31 0.64
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 30 1.1
01_05_0693 - 24339917-24340524,24340778-24341252 30 1.1
09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183 29 1.5
07_01_0058 + 438157-438660 29 1.5
05_05_0362 + 24415257-24415481,24415585-24415835,24416659-244167... 29 2.6
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90... 28 3.4
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 28 3.4
09_06_0303 - 22149214-22149474,22150099-22150236,22150856-221511... 27 6.0
09_06_0302 - 22144271-22144543,22144946-22145083,22146004-221462... 27 7.9
09_04_0611 - 18948169-18948788,18948876-18948981,18949063-18949386 27 7.9
08_01_1006 - 10191817-10191822,10192449-10192745,10192826-101929... 27 7.9
01_05_0286 - 20403748-20403828,20404493-20404693,20404774-204049... 27 7.9
>07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733
Length = 194
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +3
Query: 72 VVMASSADTDPPRHYDLNQA--KELFESFVKEHNREYKDDADRELHYQSFKKNLAEINQL 245
+V A +ADTD + +++ K FE ++KEH R Y ++ Y++FKK + IN+L
Sbjct: 43 IVDADAADTDEDGNNAVDEPAMKAKFEDWMKEHGRIYITKKEKAHRYENFKKAMKGINEL 102
Query: 246 NEK 254
N K
Sbjct: 103 NIK 105
>10_07_0172 +
13804803-13805293,13805423-13805537,13805766-13805831,
13805921-13806009,13806103-13806193,13806312-13806458,
13806575-13806667,13806745-13806846,13806957-13807541,
13808523-13808813,13808866-13808937
Length = 713
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +2
Query: 233 DKPIEREDPYTTFGINKFA---DYTPEEQQSRLGLRLPAKKT*VLRLQSIGMLFQTK*MY 403
DK P T G ++FA D TPE+ G+ P + +RLQ + F+T+
Sbjct: 94 DKESCSSKPNATAGASRFALAGDQTPEDSPVIAGVASPKHQAAAVRLQKVYKSFRTRRQL 153
Query: 404 CDC 412
DC
Sbjct: 154 ADC 156
>07_01_0064 + 463358-464341
Length = 327
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +3
Query: 63 IATVVMASSADTDPPRHYDLNQAKELFESFVKEHNREYKDDADRELHYQSFKKNLAEINQ 242
+A V MAS A T RH + ++ EH R YKD A++ ++ FK N+ I++
Sbjct: 1 MAKVTMASRAGTMEARH----------DKWMAEHGRTYKDAAEKARRFRVFKANVDLIDR 50
Query: 243 LN 248
N
Sbjct: 51 SN 52
>04_01_0537 + 6970887-6971319,6971428-6971540,6971552-6972016
Length = 336
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 144 ESFVKEHNREYKDDADRELHYQSFKKNLAEINQLN 248
E ++ ++ R YKDDA++ ++ FK N+A I N
Sbjct: 38 ERWMAQYGRMYKDDAEKARRFEVFKANVAFIESFN 72
>01_06_1677 +
39092268-39092306,39092395-39092447,39094259-39094350,
39094435-39094646,39095196-39095207
Length = 135
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 117 DLNQA-KELFESFVKEHNREYKDDADRELHYQSFKKNLAEINQLN 248
D QA K F+ ++ + NR YKD+A++ ++ FK + + + N
Sbjct: 85 DEEQALKVRFQEWMNKFNRNYKDEAEKAYRFEVFKSTVQYVEKFN 129
>05_01_0064 + 454786-455646,456537-456752
Length = 358
Score = 32.3 bits (70), Expect = 0.21
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 135 ELFESFVKEHNREYKDDADRELHYQSFKKNLAEINQLNEK 254
ELFE +V ++ + Y ++ ++ FK NL I+ +N+K
Sbjct: 49 ELFEKWVAKYRKAYASFEEKVRRFEVFKDNLNHIDDINKK 88
>05_05_0319 -
24080914-24080929,24082320-24082621,24082666-24082787,
24083189-24083534
Length = 261
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 132 KELFESFVKEHNREYKDDADRELHYQSFKKNLAEINQLN 248
K F+ ++KEHNR Y + ++ Y+ FK+ ++ N
Sbjct: 183 KARFQDWMKEHNRSYSTEEEKARCYEIFKETAIRADKAN 221
>04_01_0548 + 7103540-7103972,7104081-7104667
Length = 339
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 144 ESFVKEHNREYKDDADRELHYQSFKKNLAEINQLN 248
E ++ ++ R Y+DDA++ ++ FK N+A I N
Sbjct: 38 ERWMAQYGRVYRDDAEKARRFEVFKANVAFIESFN 72
>06_03_0575 + 22431744-22432212,22432473-22433077
Length = 357
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 117 DLNQAKELFESFVKEHNREYKDDADRELHYQSFKKNLAEINQLN 248
D + +E +E + +H R YKD ++ ++ F+ N I+ N
Sbjct: 41 DDSAMRERYEKWAADHGRTYKDSLEKARRFEVFRTNALFIDSFN 84
>01_07_0339 + 42848065-42848943,42849308-42849526
Length = 365
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 135 ELFESFVKEHNREYKDDADRELHYQSFKKNLAEINQLNEK 254
ELFE F+ ++ + Y ++ ++ FK NL I++ N+K
Sbjct: 50 ELFEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKK 89
>12_01_0990 + 10052430-10052895,10053633-10054219
Length = 350
Score = 30.7 bits (66), Expect = 0.64
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 144 ESFVKEHNREYKDDADRELHYQSFKKNLAEINQLN 248
E ++ +H R YKD A++ + FK N+A I N
Sbjct: 45 ERWMAQHGRVYKDAAEKARRLEVFKANVAFIESFN 79
>04_01_0562 + 7212504-7212849,7212946-7213544
Length = 314
Score = 30.7 bits (66), Expect = 0.64
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 144 ESFVKEHNREYKDDADRELHYQSFKKNLAEINQLN 248
E ++ +H R Y DDA++ + F+ N+A I +N
Sbjct: 6 ERWMAKHGRAYADDAEKARRLEVFRDNVAFIESVN 40
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 15 LLIHCAKMNFVSVALLIATVVMASSADTDPPRH-YDLNQAK--ELFESFVKEHNREY 176
L+IHC +MN+V + V + P H Y L++ K E ++ E + Y
Sbjct: 410 LIIHCGRMNYVEAEAMKKPVAYLNPCRISKPNHTYTLDEKKLPEHIKAMTPEERKAY 466
>01_05_0693 - 24339917-24340524,24340778-24341252
Length = 360
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 51 VALLIATVVMASSADTDPPRHYDLNQAKELFESFVKEHNREYKDDADRELHYQSFKKNLA 230
+ALL+ V A++A D PR A+ E ++ R Y D A++ + F N
Sbjct: 15 LALLVVAVAAAAAARGDQPRRGHSMAARH--ERWMARFGRAYADAAEKARRMEVFAANAE 72
Query: 231 EINQLN 248
++ N
Sbjct: 73 RVDAAN 78
>09_06_0304 - 22154086-22154364,22154679-22155058,22155763-22156183
Length = 359
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +3
Query: 138 LFESFVKEHNREYKDDADRELHYQSFKKNLAEINQLNEK 254
L++ + + H +D A+++ +++FK N +N+ N+K
Sbjct: 29 LYQRWSRVHGLTSRDLAEKQGRFEAFKANARHVNEFNKK 67
>07_01_0058 + 438157-438660
Length = 167
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 144 ESFVKEHNREYKDDADRELHYQSFKKNLAEINQLN 248
+ ++ + NREYKD+A++ ++ FK + + N
Sbjct: 86 QEWMNKFNREYKDEAEKAYRFEIFKSTVRFAEKFN 120
>05_05_0362 +
24415257-24415481,24415585-24415835,24416659-24416755,
24417272-24417820,24418029-24418482,24418747-24418860,
24418940-24419023,24419499-24420067
Length = 780
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 336 LLRRHKFSDFSLSECYSKRNKCIVTACKMFKIYRI 440
L R + +DFS+ C S N VT K K Y +
Sbjct: 716 LAREKEINDFSIKRCISVLNSMDVTKAKKVKAYTV 750
>08_01_0114 -
900530-901191,901269-901338,901536-901640,901721-901831,
901912-902016,902245-902391,903273-903354,903445-903786,
903873-904177,904259-904435,904799-904852,905171-905254,
905855-905968,906048-906321,907552-907926,908003-908267,
908352-908538,908615-909052,909895-909966,910037-910630,
911471-911623,911700-911828,912326-912657,912705-912840,
913046-913491,913580-915087,915169-915431,915622-915738,
915844-916014,916743-916845,916930-916988,918360-918461,
918560-918649,918727-918877,919745-919830,919926-920102,
920915-920978,921859-922008,923132-923211,923311-923376,
924540-924747,925502-925575,925761-925848,926140-926312,
926541-926609,926698-926741,927074-927167,927290-927366,
927475-927552,927992-928085
Length = 3314
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 9 VPLLIHCAKMNFVSVALLIATVVMASSADTDPPRHYDLNQAKELFESFVKEHNR 170
+ + + C K N S L VV SA +P Y+L +LF SF +H+R
Sbjct: 603 ISVQVDCPKSNH-SPEALTRVVVQEFSAIYEPVFIYNLMHIYDLFSSFQFQHDR 655
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 188 RQRAALSIIQEKLGRDKPIEREDPYTTFGINKFADYTPEEQQS 316
RQ ++ ++Q L P +P +T D PE QQS
Sbjct: 1791 RQSISVPLVQSSLSSQNPPAEAEPASTLSRETARDVQPERQQS 1833
>09_06_0303 -
22149214-22149474,22150099-22150236,22150856-22151100,
22151344-22151809
Length = 369
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Frame = +3
Query: 45 VSVALLIATVVMASSADTDPP-RHYDLNQAK---ELFESFVKEHNREYKDDADREL---H 203
++VAL ++ A++AD D R DL + +L+E + + + +D ++
Sbjct: 7 LAVALSAILLLAAAAADVDVTVRDSDLESEETMWDLYERWRRVYASSSQDLPSSDMMKSR 66
Query: 204 YQSFKKNLAEINQLNEK 254
+++FK N ++N+ N+K
Sbjct: 67 FEAFKANARQVNEFNKK 83
>09_06_0302 -
22144271-22144543,22144946-22145083,22146004-22146278,
22146486-22146957
Length = 385
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 177 KDDADRELHYQSFKKNLAEINQLNEK 254
+D AD E +++FK N +N+ N+K
Sbjct: 59 RDLADVESRFEAFKANARHVNEFNKK 84
>09_04_0611 - 18948169-18948788,18948876-18948981,18949063-18949386
Length = 349
Score = 27.1 bits (57), Expect = 7.9
Identities = 8/36 (22%), Positives = 20/36 (55%)
Frame = +3
Query: 141 FESFVKEHNREYKDDADRELHYQSFKKNLAEINQLN 248
FE ++ H R Y D +++ ++ +++N+ + N
Sbjct: 31 FEQWMIRHGRAYTDAGEKQRRFEVYRRNVELVETFN 66
>08_01_1006 -
10191817-10191822,10192449-10192745,10192826-10192975,
10194558-10195370
Length = 421
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 336 LLRRHKFSDFSLSECYSKRNKCIVTACKMFKIYR 437
L + F+++ YSK NK V AC++ + +R
Sbjct: 376 LSKTESLQSFAVTFLYSKSNKEYVKACRVLRAFR 409
>01_05_0286 -
20403748-20403828,20404493-20404693,20404774-20404955,
20405022-20405187,20405318-20405506,20409155-20409238,
20409482-20409550,20409638-20409700,20410327-20410425,
20410882-20410983,20411237-20411341,20412259-20412372
Length = 484
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 85 HRRIQILRDIMTSIKPKNCSRVSSKNITGNTRMMPTESCIINHS 216
H +IQ L +I+ + K + +SKN N PT++ +I S
Sbjct: 246 HNQIQSLTNIIAAFKEEKTISTTSKNSKPNKPNPPTQTPVIAKS 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,995,493
Number of Sequences: 37544
Number of extensions: 193449
Number of successful extensions: 557
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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