Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00803
(483 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 34 0.30
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 34 0.30
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein. 34 0.30
D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein. 31 2.8
BC044627-1|AAH44627.1| 682|Homo sapiens SCRIB protein protein. 31 2.8
BC014632-1|AAH14632.2| 832|Homo sapiens SCRIB protein protein. 31 2.8
AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein. 31 2.8
AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein. 31 2.8
AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein. 31 2.8
BX538342-1|CAD98105.1| 1122|Homo sapiens hypothetical protein pr... 29 8.6
AK023435-1|BAB14573.1| 462|Homo sapiens protein ( Homo sapiens ... 29 8.6
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 33.9 bits (74), Expect = 0.30
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 135 ELFESFVKEHNREYKDDA--DRELHYQSFKKNLAEINQLNE 251
EL +S ++ N +KD +RE ++ K+NL+E+ QLNE
Sbjct: 626 ELMQSLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNE 666
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 33.9 bits (74), Expect = 0.30
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 135 ELFESFVKEHNREYKDDA--DRELHYQSFKKNLAEINQLNE 251
EL +S ++ N +KD +RE ++ K+NL+E+ QLNE
Sbjct: 341 ELMQSLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNE 381
>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
Length = 1978
Score = 33.9 bits (74), Expect = 0.30
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +3
Query: 135 ELFESFVKEHNREYKDDA--DRELHYQSFKKNLAEINQLNE 251
EL +S ++ N +KD +RE ++ K+NL+E+ QLNE
Sbjct: 626 ELMQSLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNE 666
>D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein.
Length = 1630
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 194 RAALSIIQEKLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q ++ R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847
>BC044627-1|AAH44627.1| 682|Homo sapiens SCRIB protein protein.
Length = 682
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 194 RAALSIIQEKLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q ++ R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 97 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 143
>BC014632-1|AAH14632.2| 832|Homo sapiens SCRIB protein protein.
Length = 832
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 194 RAALSIIQEKLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q ++ R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 3 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 49
>AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein.
Length = 1630
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 194 RAALSIIQEKLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q ++ R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847
>AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein.
Length = 1601
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 194 RAALSIIQEKLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q ++ R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 772 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 818
>AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein.
Length = 1630
Score = 30.7 bits (66), Expect = 2.8
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 194 RAALSIIQEKLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q ++ R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847
>BX538342-1|CAD98105.1| 1122|Homo sapiens hypothetical protein
protein.
Length = 1122
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 120 LNQAKELFESFVKEHNREYKDDADRELHYQSFKKNLAEI 236
L+ +K F S++K H + Y D E F+K+L +I
Sbjct: 847 LHNSKSFFRSYIKNHIKRYCSDNGGEKMKTFFEKSLIDI 885
>AK023435-1|BAB14573.1| 462|Homo sapiens protein ( Homo sapiens
cDNA FLJ13373 fis, clone PLACE1000749. ).
Length = 462
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 120 LNQAKELFESFVKEHNREYKDDADRELHYQSFKKNLAEI 236
L+ +K F S++K H + Y D E F+K+L +I
Sbjct: 187 LHNSKSFFRSYIKNHIKRYCSDNGGEKMKTFFEKSLIDI 225
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,894,145
Number of Sequences: 237096
Number of extensions: 1074074
Number of successful extensions: 2423
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2423
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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