Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00797
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    27   0.14 
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              25   0.55 
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    25   0.55 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   2.9  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   5.2  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   5.2  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   5.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.2  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +2

Query: 257 ESACECCQAAKYSGVSVRLTC---EDGTVRPHRVAT--PARCHCAAC 382
           E +C CCQ +     SV L C   + G  +  +V T  P  C C  C
Sbjct: 72  ERSCMCCQESGEREASVSLFCPRAKPGEKKFRKVITKAPLECMCRPC 118


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +2

Query: 290 YSGVSVRLTCEDGTVRPHRVATPARCHCAACG 385
           Y    ++L  E+  V   ++  P  C C  CG
Sbjct: 110 YDADGIKLMNEENGVMEIKIREPVECKCIKCG 141


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +2

Query: 290 YSGVSVRLTCEDGTVRPHRVATPARCHCAACG 385
           Y    ++L  E+  V   ++  P  C C  CG
Sbjct: 110 YDADGIKLMNEENGVMEIKIREPVECKCIKCG 141


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 548 INF*RLSN*QKYKIVVVLKKNTWQ 619
           I F  LSN +KY+ V VLK +T Q
Sbjct: 593 IEFTDLSNERKYEDVCVLKTDTNQ 616


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 36  DIVNTTCCQICNEKPQALSKCVPKSIPSSDTVG 134
           D +N     + +EKPQ  ++C+ K     D  G
Sbjct: 45  DDINEVNFDVEDEKPQRYNECILKQFNIVDESG 77


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 36  DIVNTTCCQICNEKPQALSKCVPKSIPSSDTVG 134
           D +N     + +EKPQ  ++C+ K     D  G
Sbjct: 45  DDINEVNFDVEDEKPQRYNECILKQFNIVDESG 77


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +2

Query: 125 HCRS-DPHPDGSPRPVRQQVPHHRLHGVP 208
           HC +  P P G    +++QVP  R  G P
Sbjct: 351 HCGNFPPRPMGPWISIQEQVPRFRYIGPP 379


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +2

Query: 146 PDGSPRPVRQQVPHHRLHGVPRLLRLWNYL*QPDRYDESACECCQ 280
           P G  + V    P+H L G   L  +         Y   +CE C+
Sbjct: 87  PSGQNKAVAPYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCK 131


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +2

Query: 146 PDGSPRPVRQQVPHHRLHGVPRLLRLWNYL*QPDRYDESACECCQ 280
           P G  + V    P+H L G   L  +         Y   +CE C+
Sbjct: 87  PSGQNKAVAPYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCK 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,916
Number of Sequences: 438
Number of extensions: 4501
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)