Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00795
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0152 - 1168928-1169377 119 2e-27
11_01_0155 - 1287003-1287452 119 2e-27
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539... 35 0.047
07_03_0156 - 14524757-14526403 30 1.8
07_03_0227 - 15398371-15398925 29 2.4
03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916... 29 2.4
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828... 29 3.1
11_05_0035 - 18509505-18509615,18509840-18509950,18510318-185103... 29 4.1
10_07_0132 + 13263577-13263732,13265391-13265456,13265607-132657... 29 4.1
01_01_0754 - 5823076-5823089,5823797-5823911,5823992-5824045,582... 29 4.1
11_01_0523 - 4109070-4109984,4110532-4110936 28 7.2
04_04_1154 - 31297628-31298020,31298150-31298300,31298389-312986... 28 7.2
11_04_0233 + 15168851-15170263 27 9.5
08_01_0054 - 367770-370166 27 9.5
02_05_0156 + 26341904-26342801,26343469-26344148 27 9.5
01_07_0053 + 40772966-40773080,40773484-40773578,40773730-407738... 27 9.5
>12_01_0152 - 1168928-1169377
Length = 149
Score = 119 bits (287), Expect = 2e-27
Identities = 50/94 (53%), Positives = 74/94 (78%)
Frame = -2
Query: 508 KKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGG 329
KKTA AV+YCK G G+++VNG P++L+ P +L+ K EPILL G+ +F +D+R+ V+GG
Sbjct: 19 KKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGG 78
Query: 328 GHVAQVYAIRQAISKALIAFYQKYVTKPQRRKSK 227
G +Q+YAIRQAI+KAL+A+YQKYV + +++ K
Sbjct: 79 GKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVK 112
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 254 DEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 117
DEASKKE+KDI +YDR+LLVADPRRCEPKKFGG GARAR+QKSYR
Sbjct: 104 DEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149
>11_01_0155 - 1287003-1287452
Length = 149
Score = 119 bits (287), Expect = 2e-27
Identities = 50/94 (53%), Positives = 74/94 (78%)
Frame = -2
Query: 508 KKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGG 329
KKTA AV+YCK G G+++VNG P++L+ P +L+ K EPILL G+ +F +D+R+ V+GG
Sbjct: 19 KKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGG 78
Query: 328 GHVAQVYAIRQAISKALIAFYQKYVTKPQRRKSK 227
G +Q+YAIRQAI+KAL+A+YQKYV + +++ K
Sbjct: 79 GKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVK 112
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = -1
Query: 254 DEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 117
DEASKKE+KDI +YDR+LLVADPRRCEPKKFGG GARAR+QKSYR
Sbjct: 104 DEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149
>07_03_1553 -
27653473-27653490,27653634-27653673,27653852-27653939,
27654150-27654230,27654644-27655084,27655692-27656325
Length = 433
Score = 35.1 bits (77), Expect = 0.047
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = -2
Query: 508 KKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGG 329
+K + A + + G G VN + D P +L ++ + D+ TVKGG
Sbjct: 297 RKCSIARVWIQPGDGKFIVNDKQFDSYFP-ILDHRADLLRPFTVTKTLGRWDVTCTVKGG 355
Query: 328 GHVAQVYAIRQAISKAL 278
G QV AIR IS+AL
Sbjct: 356 GVSGQVGAIRLGISRAL 372
>07_03_0156 - 14524757-14526403
Length = 548
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/101 (21%), Positives = 40/101 (39%)
Frame = -1
Query: 359 GRHQSDSQGWWSCSTSLRYQTSYFEGSDRLLPEICDEASKKEIKDILVQYDRSLLVADPR 180
G + D +GW+ R Q+S EG+ ++ P +++ DIL++ ++ R
Sbjct: 392 GDSKHDKKGWFG-HWGKRVQSSKLEGTKKMAPPRSSLCVDEKVSDILIESPSNVQTRPGR 450
Query: 179 RCEPKKFGGPGARARYQKSYR*AFNETIGWYRRGGLLSLRY 57
G R + + R A + G R+ G Y
Sbjct: 451 HSVDVVRGDESRRGKERDYRRPAASSECGHRRKEGSKESEY 491
>07_03_0227 - 15398371-15398925
Length = 184
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 394 VPEVCTAAVWAQPSPMDARLHAAFH--DHACNTQLRWRF 504
+P +C A W P+ A H FH C+ + RW +
Sbjct: 23 LPPLCRAPWWPSPASSAAATHLRFHPRHRRCHPRRRWSY 61
>03_01_0009 -
89127-89924,90090-90518,90582-90716,91102-91382,
91634-91809,91899-92011,92157-92278,92375-92594
Length = 757
Score = 29.5 bits (63), Expect = 2.4
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 6/125 (4%)
Frame = -1
Query: 536 PSRPSKYSDEENRHRSCVLQAWSWNAAC------KRASIGLG*AQTAAVQTSGTYPFARQ 375
PS K S +R+RS L + + +R + G + + G+ RQ
Sbjct: 233 PSENPKNSSPAHRNRSLTLYDYLNGSTSIYPDKDRRVNSSTGTESSKPSELKGSNEVLRQ 292
Query: 374 GKILYGRHQSDSQGWWSCSTSLRYQTSYFEGSDRLLPEICDEASKKEIKDILVQYDRSLL 195
+L G + + LR + +G +L+ + D+AS++ K L+ Y R
Sbjct: 293 ESLLQGMLSDNKDHISTELEKLRLELRLIQGKHKLVQDESDDASRQASKVDLICYQRMAE 352
Query: 194 VADPR 180
+A R
Sbjct: 353 LAAKR 357
>07_03_1483 +
26881032-26882035,26882130-26882204,26882324-26882861,
26883999-26884895,26885178-26885327,26885459-26885791,
26886501-26886695,26887805-26887918
Length = 1101
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 420 DCCST-NFRNLSFCSARKNSLWSTSE*QSRVVVM 322
+CC+ + +LS C KN++W S S ++V+
Sbjct: 725 ECCNQLRYLSLSNCDVGKNAIWKISAPNSNIIVL 758
>11_05_0035 -
18509505-18509615,18509840-18509950,18510318-18510377,
18510459-18510576,18510711-18510811,18510891-18510962,
18511069-18511156,18511423-18511557,18511655-18511767,
18511980-18512051,18512154-18512258,18512371-18512484,
18512587-18512681,18513539-18513686
Length = 480
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -1
Query: 365 LYGRHQSDSQGWWSCSTSLRYQTSYFEGSDRLLPEICDEASKKEIKDILVQY 210
+Y Q++ + + T Y G LL +CD+ ++E+K+++V Y
Sbjct: 345 IYFTFQANMVSYQNLITKSMYDKQLDSGKGTLL-HLCDDVIQQEVKEVIVSY 395
>10_07_0132 +
13263577-13263732,13265391-13265456,13265607-13265705,
13267020-13267084,13267210-13267294,13267389-13267422,
13267539-13267642,13268085-13268408,13269090-13269605
Length = 482
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 513 GRRKPPPQLRIASVVMECCV*TGVHWTW 430
G+ K PPQ+ ++ + + C V GV + W
Sbjct: 13 GKGKAPPQISLSGLFLACMVAGGVQYGW 40
>01_01_0754 -
5823076-5823089,5823797-5823911,5823992-5824045,
5825629-5827251
Length = 601
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = -2
Query: 367 FSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVTKPQRRKSKTS*FNTI 206
FS +D R G H++ + + + FYQ++ K SK F +
Sbjct: 407 FSALDGRFVTSAGRHISATGWVNSSYGNVMTTFYQRFSYKNSNLYSKNGTFQVV 460
>11_01_0523 - 4109070-4109984,4110532-4110936
Length = 439
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 334 GGGHVAQVYAIRQAISKALIAFY 266
GGG V +++A++KAL+AFY
Sbjct: 48 GGGGFFDVGRLKEALAKALVAFY 70
>04_04_1154 -
31297628-31298020,31298150-31298300,31298389-31298620,
31298700-31298910,31299137-31299255,31299341-31299415,
31299991-31300189,31300258-31300664,31300775-31300839,
31300967-31301011,31301449-31301520,31301597-31301671,
31301912-31301983,31302178-31302249,31302525-31302596,
31302880-31302951,31303056-31303127,31304064-31304135,
31304375-31304561,31304686-31304815
Length = 930
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 451 NGRPLDLVEPRLLQYKLQEPILLL 380
NG PLD V+P+L ++ +E I ++
Sbjct: 807 NGHPLDFVDPKLSEFNSEEVIRVI 830
>11_04_0233 + 15168851-15170263
Length = 470
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 287 EGSDRLLPEICDEASKKEIKDILVQYDRSLLVADPRRCEP 168
+ SD L+ + C E I+ + QYD+ +LV P EP
Sbjct: 221 KASDVLVFKTCAEMEGPYIEYVATQYDKPILVTGPLVPEP 260
>08_01_0054 - 367770-370166
Length = 798
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Frame = -3
Query: 567 NAAVQEA-RREPIQAVQVF------GRRKPPPQLRIASVVMECC 457
N A+ +A R P A+ +F R K PP L SVV++CC
Sbjct: 58 NRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCC 101
>02_05_0156 + 26341904-26342801,26343469-26344148
Length = 525
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 98 WFR*RLNGKISGIWHGH 148
WFR R G I GIW+ H
Sbjct: 155 WFRGRRRGLIMGIWNAH 171
>01_07_0053 +
40772966-40773080,40773484-40773578,40773730-40773843,
40773984-40774088,40774179-40774250,40774293-40774346,
40774507-40774619,40774705-40774839,40774941-40775009,
40775140-40775227,40775327-40775398,40775476-40775576,
40775836-40775953,40776054-40776113,40776206-40776316,
40776499-40776573,40776821-40776854,40777453-40777805,
40778154-40778222,40778526-40778762
Length = 729
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -1
Query: 365 LYGRHQSDSQGWWSCSTSLRYQTSYFEGSDRLLPEICDEASKKEIKDILVQY 210
+Y Q + + + T Y G LL +CD+ ++E+K+I++ Y
Sbjct: 375 IYLSFQQNMATYQNLITQSMYDKQLDSGKGTLL-HLCDDVIQQEVKEIIISY 425
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,070,702
Number of Sequences: 37544
Number of extensions: 392868
Number of successful extensions: 1192
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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