Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00795
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 140 1e-33
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z77655-5|CAB01132.2| 458|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68341-1|CAA92764.1| 258|Caenorhabditis elegans Hypothetical pr... 28 6.5
L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical... 28 6.5
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 27 8.6
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 27 8.6
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 140 bits (338), Expect = 1e-33
Identities = 59/94 (62%), Positives = 82/94 (87%)
Frame = -2
Query: 508 KKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGG 329
KKTATAVA+CK+G G+++VNGRPL+ +EP++L+ KLQEP+LL+GKE+F VDIR+ V GG
Sbjct: 14 KKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGG 73
Query: 328 GHVAQVYAIRQAISKALIAFYQKYVTKPQRRKSK 227
GHVAQ+YA+RQA++KAL+A+Y KYV + +R+ K
Sbjct: 74 GHVAQIYAVRQALAKALVAYYHKYVDEQSKRELK 107
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = -1
Query: 254 DEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 117
DE SK+E+K+I YD+SLLVADPRR E KKFGGPGARARYQKSYR
Sbjct: 99 DEQSKRELKNIFAAYDKSLLVADPRRRESKKFGGPGARARYQKSYR 144
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.099
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 257 CDEASKKEIKDILVQYDRSLLVADPRRCE 171
CDE +KE+ D+ QYDRS+ + D R E
Sbjct: 152 CDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180
>Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical
protein F58G6.7 protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = -3
Query: 516 FGRRKPPPQLRIASVVMECCV*TGVHWTWLSPDCCSTNFRNLSFCSARKNSLWSTSE*QS 337
FGR K P+++I ++CC T W P+ + ++ ++SL S S
Sbjct: 50 FGRTKLSPKVKIVEKKVDCCCSTEKDGLWNIPETIPLTQKTVTLAPFTRDSLISKFHMAS 109
Query: 336 RVVVM*HKF 310
++V F
Sbjct: 110 SLLVFVQHF 118
>Z77655-5|CAB01132.2| 458|Caenorhabditis elegans Hypothetical
protein C56A3.6 protein.
Length = 458
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 530 RPSKYSDEENRHRSCVLQAWSWNAACKR 447
+PS SDEE+R SC L A ++ A R
Sbjct: 208 QPSTASDEEDRRESCQLDAADYHFAVSR 235
>Z68341-1|CAA92764.1| 258|Caenorhabditis elegans Hypothetical
protein F01G4.2 protein.
Length = 258
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 422 QTAAVQTSGTYPFARQGKILYGRHQSDSQG 333
QT V GT+ R G L G H+ D+ G
Sbjct: 113 QTIDVNVLGTFNVIRHGVALMGEHEKDANG 142
>L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical
protein F09G8.3 protein.
Length = 392
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 200 LLVADPRRCEPKKFGGPGARARY 132
LL DPR+ E K PGARA++
Sbjct: 365 LLTLDPRKNERSKVNQPGARAKW 387
>AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical
protein Y37A1B.9 protein.
Length = 520
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 380 RQGKILYGRHQSDSQ---GWWSCSTSLRYQTSYFEGSDRLLPEIC 255
R+ +I+ H + GW S L Y+T+Y + L P+ C
Sbjct: 259 RENEIIINIHDNPEMTRLGWTSLEYKLGYRTTYIMNLENLHPDFC 303
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 326 TTTLDCHSDVDHREFFLAEQKD-RF--LKFVLQQSG 424
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 146 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 181
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 326 TTTLDCHSDVDHREFFLAEQKD-RF--LKFVLQQSG 424
TT LDC + H EF+ AE D RF + F+ +Q G
Sbjct: 21 TTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRG 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,220,641
Number of Sequences: 27780
Number of extensions: 293223
Number of successful extensions: 771
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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