Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00791-2
         (363 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97550-4|AAK18978.2|  773|Caenorhabditis elegans Hypothetical pr...    33   0.061
Z70038-8|CAA93887.2|  618|Caenorhabditis elegans Hypothetical pr...    29   1.00 
Z68319-6|CAA92704.2|  618|Caenorhabditis elegans Hypothetical pr...    29   1.00 
AY220985-1|AAO65265.1|  618|Caenorhabditis elegans putative RNA ...    29   1.00 
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z66565-2|CAA91478.2|  502|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z81050-12|CAN86586.1|  420|Caenorhabditis elegans Hypothetical p...    26   7.0  
U40800-8|ABB51192.1|  349|Caenorhabditis elegans Hypothetical pr...    26   9.3  

>U97550-4|AAK18978.2|  773|Caenorhabditis elegans Hypothetical
           protein T20F7.1 protein.
          Length = 773

 Score = 33.1 bits (72), Expect = 0.061
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +1

Query: 91  RNERRRNAIRELQNKTDIIQKIADLFRHLQAEIIAETSAPNII 219
           RN  R+NA ++++  T I+ +  +   H+  EII ET++ N+I
Sbjct: 709 RNTARKNAAKKVKIDTSIVVQSDEDMEHVAEEIIEETTSCNVI 751


>Z70038-8|CAA93887.2|  618|Caenorhabditis elegans Hypothetical
           protein ZK1067.6 protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 25  IEDQLYFMTKTKGKPTRQSDADRNERRRNAIRELQNKTDII-QKIADLFRHLQAEIIAET 201
           + D++ F+T+T G+PT  +   + E   +A + L     +I Q+  +LF+   AE+    
Sbjct: 306 LTDKILFITRTDGRPTGDAFV-QFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVV 364

Query: 202 SAPNIIS 222
              N+I+
Sbjct: 365 KRCNLIN 371


>Z68319-6|CAA92704.2|  618|Caenorhabditis elegans Hypothetical
           protein ZK1067.6 protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 25  IEDQLYFMTKTKGKPTRQSDADRNERRRNAIRELQNKTDII-QKIADLFRHLQAEIIAET 201
           + D++ F+T+T G+PT  +   + E   +A + L     +I Q+  +LF+   AE+    
Sbjct: 306 LTDKILFITRTDGRPTGDAFV-QFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVV 364

Query: 202 SAPNIIS 222
              N+I+
Sbjct: 365 KRCNLIN 371


>AY220985-1|AAO65265.1|  618|Caenorhabditis elegans putative RNA
           binding protein SYM-2 protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +1

Query: 25  IEDQLYFMTKTKGKPTRQSDADRNERRRNAIRELQNKTDII-QKIADLFRHLQAEIIAET 201
           + D++ F+T+T G+PT  +   + E   +A + L     +I Q+  +LF+   AE+    
Sbjct: 306 LTDKILFITRTDGRPTGDAFV-QFETEEDAQQGLLKHRQVIGQRYIELFKSTAAEVQQVV 364

Query: 202 SAPNIIS 222
              N+I+
Sbjct: 365 KRCNLIN 371


>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
            C03D6.4 protein.
          Length = 1390

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 50   PKPKVNRLVNQMPTGMSVEGTPSENFKT 133
            PKP V   V +  TG +++ TPS +F +
Sbjct: 1032 PKPAVQTPVKEEETGSNIQKTPSFSFNS 1059


>Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical
           protein T10B10.7 protein.
          Length = 818

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 16/65 (24%), Positives = 31/65 (47%)
 Frame = +1

Query: 1   LEEFVATYIEDQLYFMTKTKGKPTRQSDADRNERRRNAIRELQNKTDIIQKIADLFRHLQ 180
           LEE++ T ++  LY   K K  P  Q    RN++R   +  L+ K    +   ++  H+ 
Sbjct: 40  LEEYLDTAVKSYLYNGGKGKLVPISQLVTIRNKQRNALLGALRRKKGRGKSGPNILEHID 99

Query: 181 AEIIA 195
            + ++
Sbjct: 100 QDALS 104


>Z69646-8|CAA93477.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 311 FDCQLLMAWHGHASVF 264
           FDCQ LM++HG   VF
Sbjct: 795 FDCQGLMSYHGETIVF 810


>Z66565-2|CAA91478.2|  502|Caenorhabditis elegans Hypothetical
           protein T04F8.2 protein.
          Length = 502

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 356 ILSFYNYHPYQVEILFDCQLLMAWHGHASVFV-IMY 252
           +L FYN   +  ++L D  +  AW GH  + + I+Y
Sbjct: 334 VLFFYNC-TFVYDVLHDVDIYSAWPGHGMILIRIIY 368


>Z50794-7|CAA90661.3|  896|Caenorhabditis elegans Hypothetical
           protein F59F5.7 protein.
          Length = 896

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 311 FDCQLLMAWHGHASVF 264
           FDCQ LM++HG   VF
Sbjct: 795 FDCQGLMSYHGETIVF 810


>Z81050-12|CAN86586.1|  420|Caenorhabditis elegans Hypothetical
           protein C50B6.14b protein.
          Length = 420

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 19/75 (25%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
 Frame = +1

Query: 55  TKGKPTRQSDADRNERRR--NAIRELQNKTDIIQKIADLFRHLQAEIIAETSAPNIISPY 228
           TK K    +DA  NE++   N++  ++NK   IQKIAD+  +L+ ++  +    +  +P+
Sbjct: 116 TKRKNMIGNDAV-NEKQLVLNSLESMENK---IQKIADMLTYLELKL--DQFRASSYNPH 169

Query: 229 FRDIFSAVYIITNTD 273
           + ++    +++ +T+
Sbjct: 170 WAEVRGLEFVLNSTN 184


>U40800-8|ABB51192.1|  349|Caenorhabditis elegans Hypothetical
           protein D2096.7b protein.
          Length = 349

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 62  VNRLVNQMPTGMSVEG 109
           +NRL   MPTG S EG
Sbjct: 71  INRLCKSMPTGFSFEG 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,253,732
Number of Sequences: 27780
Number of extensions: 156968
Number of successful extensions: 381
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)