Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00791-2
         (363 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.5  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   2.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   2.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   2.6  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   4.5  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   5.9  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   5.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 216 NFPLFP*YILSCVHYY 263
           N P FP Y LSC+ ++
Sbjct: 199 NMPEFPLYQLSCILFF 214


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 208 PNIISPYFRDI 240
           PN+I  YFRD+
Sbjct: 31  PNVIDHYFRDL 41


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +3

Query: 213 YNFPLF-P*YILSCVHYYKHRRV 278
           ++ P+F   +I SC+ YYK  ++
Sbjct: 57  FSLPIFGTRWIFSCIGYYKLNKI 79


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -2

Query: 311 FDCQLL-MAWHGHASVFVIMYTA 246
           F  ++L M W G A + V  YTA
Sbjct: 634 FSARVLGMVWAGFAMIIVASYTA 656


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +1

Query: 208 PNIISPYFRDIFSAVYII 261
           PN+I+P+F D+  ++ ++
Sbjct: 51  PNVINPFFCDMSPSLSLL 68


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 58  KGKPTRQSDADRNERRRNAIRELQNK 135
           K    RQ+D  +N  R+N  ++  NK
Sbjct: 479 KQNGNRQNDNKQNGNRQNGNKQNDNK 504



 Score = 20.2 bits (40), Expect = 7.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 58  KGKPTRQSDADRNERRRNAIRELQN 132
           K    RQ+D  RN  R+N  +  QN
Sbjct: 504 KQNGNRQNDNKRNGNRQNDNQNNQN 528


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 208 PNIISPYFRDI 240
           PN+I+P+F D+
Sbjct: 50  PNVINPFFCDM 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,666
Number of Sequences: 438
Number of extensions: 2055
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)